Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32256
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 157 6e-39
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 157 8e-39
05_01_0043 - 295041-295173,296252-296537,296616-296697 156 1e-38
01_07_0267 + 42410174-42410252,42410679-42411097 147 5e-36
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 107 9e-24
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 57 1e-08
01_06_0836 - 32321431-32321556,32321656-32321872,32321975-323235... 32 0.30
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 32 0.40
10_08_0401 + 17629912-17630376 29 2.1
05_03_0591 + 15892772-15893412,15893478-15893910 28 4.9
03_06_0749 + 35975653-35976453 28 6.5
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 28 6.5
12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001 27 8.5
05_05_0070 + 22148595-22148907,22148988-22149104,22149196-221493... 27 8.5
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 157 bits (381), Expect = 6e-39
Identities = 84/144 (58%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 83 PFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXX 262
PFFG +GAASA+IFS +GAAYGTAKS G+A+ VM PEL+MKSI+PVVM
Sbjct: 12 PFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 263 XXXXXXXXXQEPAN-YPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLF 439
A Y L+ + HL +GLA +GLAAG AI IVGDA VR AQQP LF
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131
Query: 440 VGMILILIFAEVLGLYGLIVAIYL 511
VGMILILIFAE L LYGLIV I L
Sbjct: 132 VGMILILIFAEALALYGLIVGIIL 155
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 157 bits (380), Expect = 8e-39
Identities = 83/144 (57%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 83 PFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXX 262
PFFG +GAASA++FS +GAAYGTAKS G+A+ VM PEL+MKSI+PVVM
Sbjct: 12 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 71
Query: 263 XXXXXXXXXQEPAN-YPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLF 439
A Y L+ + HL +GLA +GLAAG AI IVGDA VR AQQP LF
Sbjct: 72 IAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 131
Query: 440 VGMILILIFAEVLGLYGLIVAIYL 511
VGMILILIFAE L LYGLIV I L
Sbjct: 132 VGMILILIFAEALALYGLIVGIIL 155
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 156 bits (379), Expect = 1e-38
Identities = 83/144 (57%), Positives = 95/144 (65%), Gaps = 1/144 (0%)
Frame = +2
Query: 83 PFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXX 262
PFFG +GAASA++FS +GAAYGTAKS G+A+ VM PEL+MKSI+PVVM
Sbjct: 13 PFFGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 72
Query: 263 XXXXXXXXXQEPAN-YPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLF 439
A Y L+ + HL +GLA +GLAAG AI IVGDA VR AQQP LF
Sbjct: 73 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLF 132
Query: 440 VGMILILIFAEVLGLYGLIVAIYL 511
VGMILILIFAE L LYGLIV I L
Sbjct: 133 VGMILILIFAEALALYGLIVGIIL 156
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 147 bits (357), Expect = 5e-36
Identities = 80/150 (53%), Positives = 92/150 (61%), Gaps = 1/150 (0%)
Frame = +2
Query: 65 NNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXX 244
N + PF G +GAA A++FS +GAAYGTA+S G+A VM PEL+MKSI+PVVM
Sbjct: 6 NGDEFAPFLGFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVL 65
Query: 245 XXXXXXXXXXXXXXXQEPAN-YPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTA 421
A Y + +HL AGLA LAAG AI +VGDA VR A
Sbjct: 66 GIYGLIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGVVGDAGVRANA 125
Query: 422 QQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
QQP LFVGMILILIFAE LGLYGLIV I L
Sbjct: 126 QQPKLFVGMILILIFAEALGLYGLIVGIIL 155
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 107 bits (256), Expect = 9e-24
Identities = 56/111 (50%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 83 PFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXX 262
PFFG +GAA+A++FS +GAAYGTAKS G+A+ VM PEL+MKSI+PVVM
Sbjct: 14 PFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLI 73
Query: 263 XXXXXXXXXQEPAN-YPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVR 412
A Y L+ + HL +GLA +GLAAG AI IVGDA VR
Sbjct: 74 IAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 124
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +2
Query: 323 FIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVA 502
F LGA A+ FS + A + G +P L + I+ ++ A VLG+YGLI+A
Sbjct: 16 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 75
Query: 503 IYL 511
+ +
Sbjct: 76 VII 78
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 56.8 bits (131), Expect = 1e-08
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Frame = +2
Query: 89 FGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXXXX 268
F +G A +I S LGAA+G + + + ++ P + K++I V+
Sbjct: 20 FSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 79
Query: 269 XXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFA--IC-----IVGDASVRGTAQQ 427
E L L AG A+ SGL GFA +C I+G + AQ
Sbjct: 80 IILQTKL-ESVPTALVHHPESLRAGYAIFASGLIVGFANLVCGVCVGIIGSSCALSDAQN 138
Query: 428 PXLFVGMILILIFAEVLGLYGLIVAIYL 511
LFV +++I IF LGL+G+IV I +
Sbjct: 139 SSLFVKILVIEIFGSALGLFGVIVGIIM 166
>01_06_0836 - 32321431-32321556,32321656-32321872,32321975-32323590,
32323670-32323753,32323834-32324104,32324294-32324547,
32324709-32324918,32325839-32326024
Length = 987
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2
Query: 466 ENKNKNHSDE*XRLLSSTTHACISHDAYGETGSQTRESYSQTSTQVDEPFVKGVV 302
E +KN DE LS+T C H+ YG+ G + + ++ VD P+V G+V
Sbjct: 880 EKCSKNEHDEAPLGLSNT---CKEHE-YGDKGPENLTKPGEPASSVDVPYVNGIV 930
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 31.9 bits (69), Expect = 0.40
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = -2
Query: 568 EARSTGDGSGVCSGRLFCVQVDGDDKSVKTQYFSENKNKNHSDE*XRLLSSTT--HACIS 395
E+ T G+ + + +Q+DG KS Y S++ S + +L++S + +
Sbjct: 2967 ESEDTVIGAEQGTVEVEAMQIDGISKS----YSSDSHATLQSSDSNQLVNSDSKFESSKK 3022
Query: 394 HDAYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQXVDGNN 239
HD ET +++R S D+ K +VG N+D+ Q DG++
Sbjct: 3023 HDKTDETSNESRGDNPTHSCTNDDSHDKNLVGCSPSEDLNEDNSAQLADGDD 3074
>10_08_0401 + 17629912-17630376
Length = 154
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 95 VMGAASAIIFSALGAAYGTAKSXTGIAA 178
V GAA+ F+AL AY A+ G+AA
Sbjct: 111 VAGAAAVAAFAALAVAYAVARRRVGVAA 138
>05_03_0591 + 15892772-15893412,15893478-15893910
Length = 357
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 539 CVFRAFILCTGRWRR*VRKDPILQRK 462
C RA ++C RWRR + DP QR+
Sbjct: 28 CAVRASLVCK-RWRRLLTDDPCFQRR 52
>03_06_0749 + 35975653-35976453
Length = 266
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 412 WYCSTAXVIRRNDSYSYFR*SIGSLRTYRRHLPVHKI 522
WY A IRR D+ Y R G +R RR L + ++
Sbjct: 163 WYQGEADTIRREDAEVYARKMEGMVRDVRRDLALPEL 199
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 382 GETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTS 278
G G S+T VD+P VVGW GTS
Sbjct: 4 GGGGGSLPPFLSKTYEMVDDPSTDAVVGWTPAGTS 38
>12_01_0229 + 1731288-1732513,1733037-1733106,1733267-1734001
Length = 676
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 308 PLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILI 457
P+ + + LG + V +GL +V A+VRG GM+L+
Sbjct: 338 PMPRGSVGLGMAVRVAMAGLGTNRVAAVVSAAAVRGHNAGGGALEGMVLV 387
>05_05_0070 +
22148595-22148907,22148988-22149104,22149196-22149350,
22149987-22150061,22150179-22150469,22150942-22151292,
22151390-22151794
Length = 568
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 175 RXVGDXA*ADHEVDHSCRHGGYYCHLXXGRGCPDCWCPP 291
R V + AD D CR G G + +CPP
Sbjct: 16 REVSEALTADSSADEECRRGSSSSSASSGDASSESYCPP 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,210,353
Number of Sequences: 37544
Number of extensions: 343512
Number of successful extensions: 1059
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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