Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32256
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 181 2e-45
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 181 2e-45
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 181 2e-45
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 181 2e-45
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 181 2e-45
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 181 2e-45
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 181 2e-45
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 181 2e-45
D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protei... 59 1e-08
CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein. 59 1e-08
BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting... 59 1e-08
BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting... 59 1e-08
BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting... 59 1e-08
AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transportin... 59 1e-08
D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain pro... 33 1.0
BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein. 31 3.1
AF029325-1|AAC95124.1| 51|Homo sapiens laminin beta-4 chain pr... 31 3.1
AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain pr... 31 3.1
BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein. 30 7.1
BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein. 30 7.1
AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein. 30 7.1
AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens ... 30 7.1
AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens ... 30 7.1
AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial ca... 30 7.1
AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein. 30 7.1
AB046575-1|BAC06442.1| 26|Homo sapiens V-ATPase subunit c prot... 30 7.1
AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2 pro... 30 7.1
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 181 bits (440), Expect = 2e-45
Identities = 98/151 (64%), Positives = 110/151 (72%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXX 238
+++ P Y FF VMGA++A++FSALGAAYGTAKS TGIAA SVM PE IMKSIIPVVM
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 239 XXXXXXXXXXXXXXXXXQEPANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGT 418
+ + LYK F+ LGAGL+V SGLAAGFAI IVGDA VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLNDDIS--LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 419 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 511
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protein
protein.
Length = 205
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 98 MGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXXXXXXX 277
+G AI S +GAA+G + + I V P + K+++ ++
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 278 XXXXQE-PANYP-------LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
+ A P + + GAGL V S L G + IVG + AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 434 LFVGMILILIFAEVLGLYGLIVAI 505
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 44.4 bits (100), Expect = 3e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 329 HLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 508
+LG GLA+ S + A + I I G + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 509 L 511
+
Sbjct: 111 I 111
>CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein.
Length = 205
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 98 MGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXXXXXXX 277
+G AI S +GAA+G + + I V P + K+++ ++
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 278 XXXXQE-PANYP-------LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
+ A P + + GAGL V S L G + IVG + AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 434 LFVGMILILIFAEVLGLYGLIVAI 505
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 44.4 bits (100), Expect = 3e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 329 HLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 508
+LG GLA+ S + A + I I G + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 509 L 511
+
Sbjct: 111 I 111
>BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit c'' protein.
Length = 205
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 98 MGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXXXXXXX 277
+G AI S +GAA+G + + I V P + K+++ ++
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 278 XXXXQE-PANYP-------LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
+ A P + + GAGL V S L G + IVG + AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 434 LFVGMILILIFAEVLGLYGLIVAI 505
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 44.4 bits (100), Expect = 3e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 329 HLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 508
+LG GLA+ S + A + I I G + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 509 L 511
+
Sbjct: 111 I 111
>BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 98 MGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXXXXXXX 277
+G AI S +GAA+G + + I V P + K+++ ++
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 278 XXXXQE-PANYP-------LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
+ A P + + GAGL V S L G + IVG + AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 434 LFVGMILILIFAEVLGLYGLIVAI 505
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 44.4 bits (100), Expect = 3e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 329 HLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 508
+LG GLA+ S + A + I I G + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 509 L 511
+
Sbjct: 111 I 111
>BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 98 MGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXXXXXXX 277
+G AI S +GAA+G + + I V P + K+++ ++
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 278 XXXXQE-PANYP-------LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
+ A P + + GAGL V S L G + IVG + AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 434 LFVGMILILIFAEVLGLYGLIVAI 505
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 44.4 bits (100), Expect = 3e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 329 HLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 508
+LG GLA+ S + A + I I G + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 509 L 511
+
Sbjct: 111 I 111
>AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 58.8 bits (136), Expect = 1e-08
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +2
Query: 98 MGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXXXXXXXXX 277
+G AI S +GAA+G + + I V P + K+++ ++
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 278 XXXXQE-PANYP-------LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
+ A P + + GAGL V S L G + IVG + AQ P
Sbjct: 112 SNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPS 171
Query: 434 LFVGMILILIFAEVLGLYGLIVAI 505
LFV ++++ IF +GL+G+IVAI
Sbjct: 172 LFVKILIVEIFGSAIGLFGVIVAI 195
Score = 44.4 bits (100), Expect = 3e-04
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +2
Query: 329 HLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 508
+LG GLA+ S + A + I I G + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 509 L 511
+
Sbjct: 111 I 111
>D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain
protein.
Length = 1172
Score = 32.7 bits (71), Expect = 1.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 238 YYCHLXXGRGCPDCWCPPRASQLPPLQXVH 327
Y+ L G+GC C C P S P +Q VH
Sbjct: 468 YHWKLASGQGCEPCACDPHNSPQPTVQPVH 497
>BC045172-1|AAH45172.2| 749|Homo sapiens LAMB4 protein protein.
Length = 749
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 241 YCHLXXGRGCPDCWCPPRASQ 303
Y +L GRGC C C PR SQ
Sbjct: 94 YWNLVPGRGCQSCDCDPRTSQ 114
>AF029325-1|AAC95124.1| 51|Homo sapiens laminin beta-4 chain
precursor protein.
Length = 51
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 241 YCHLXXGRGCPDCWCPPRASQ 303
Y +L GRGC C C PR SQ
Sbjct: 18 YWNLVPGRGCQSCDCDPRTSQ 38
>AF028816-1|AAC95123.1| 1761|Homo sapiens laminin beta-4 chain
precursor protein.
Length = 1761
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 241 YCHLXXGRGCPDCWCPPRASQ 303
Y +L GRGC C C PR SQ
Sbjct: 1068 YWNLVPGRGCQSCDCDPRTSQ 1088
>BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein.
Length = 1184
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens
cDNA FLJ14078 fis, clone HEMBB1002044, moderately
similar to Mus musculus mRNA for vascular cadherin-2. ).
Length = 1187
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens
cDNA FLJ13723 fis, clone PLACE2000458, weakly similar to
CADHERIN-RELATED TUMOR SUPPRESSOR PRECURSOR. ).
Length = 808
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 326 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 361
>AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial
cadherin 2 protein.
Length = 1184
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein.
Length = 1184
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AB046575-1|BAC06442.1| 26|Homo sapiens V-ATPase subunit c
protein.
Length = 26
Score = 29.9 bits (64), Expect = 7.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 59 AENNPIYGPFFGVMGAASAIIFS 127
+++ P Y FF VMGA++A++FS
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFS 26
>AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2
protein.
Length = 1184
Score = 29.9 bits (64), Expect = 7.1
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +2
Query: 407 VRGTAQQPX-LFVGMILILIFAEVLGLYGLIVAIYL 511
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,089,267
Number of Sequences: 237096
Number of extensions: 1817795
Number of successful extensions: 4160
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4152
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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