Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32256
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 165 2e-41
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 165 2e-41
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 165 2e-41
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 165 2e-41
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 146 1e-35
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 146 1e-35
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 54 8e-08
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 54 8e-08
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 31 0.82
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 30 1.4
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 30 1.4
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 2.5
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 28 5.8
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 28 5.8
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 28 5.8
Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical pr... 27 7.6
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 27 7.6
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 165 bits (402), Expect = 2e-41
Identities = 89/146 (60%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
Frame = +2
Query: 77 YGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXX 256
Y PFFG MGAASA IF+ LGAAYGTAKS GI + VM PELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 257 XXXXXXXXXXXQEP-ANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
A Y L K F HL AGL GL AG+AI IVGDA VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 434 LFVGMILILIFAEVLGLYGLIVAIYL 511
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 165 bits (402), Expect = 2e-41
Identities = 89/146 (60%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
Frame = +2
Query: 77 YGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXX 256
Y PFFG MGAASA IF+ LGAAYGTAKS GI + VM PELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 257 XXXXXXXXXXXQEP-ANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
A Y L K F HL AGL GL AG+AI IVGDA VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 434 LFVGMILILIFAEVLGLYGLIVAIYL 511
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 165 bits (402), Expect = 2e-41
Identities = 89/146 (60%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
Frame = +2
Query: 77 YGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXX 256
Y PFFG MGAASA IF+ LGAAYGTAKS GI + VM PELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 257 XXXXXXXXXXXQEP-ANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
A Y L K F HL AGL GL AG+AI IVGDA VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 434 LFVGMILILIFAEVLGLYGLIVAIYL 511
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 165 bits (402), Expect = 2e-41
Identities = 89/146 (60%), Positives = 97/146 (66%), Gaps = 1/146 (0%)
Frame = +2
Query: 77 YGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXXX 256
Y PFFG MGAASA IF+ LGAAYGTAKS GI + VM PELIMKS+IPV+M
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 257 XXXXXXXXXXXQEP-ANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPX 433
A Y L K F HL AGL GL AG+AI IVGDA VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 434 LFVGMILILIFAEVLGLYGLIVAIYL 511
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 146 bits (354), Expect = 1e-35
Identities = 76/147 (51%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
Frame = +2
Query: 74 IYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXX 253
+YGPFFG +G SA+ F+A G+AYGTAK+ TGIA+ +V P+L+MK+IIPVVM
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 254 XXXXXXXXXXXXQEP-ANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQP 430
+ ANY + F GL GL AG+AI I GDA VR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 431 XLFVGMILILIFAEVLGLYGLIVAIYL 511
+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 146 bits (354), Expect = 1e-35
Identities = 76/147 (51%), Positives = 94/147 (63%), Gaps = 1/147 (0%)
Frame = +2
Query: 74 IYGPFFGVMGAASAIIFSALGAAYGTAKSXTGIAAXSVMXPELIMKSIIPVVMXXXXXXX 253
+YGPFFG +G SA+ F+A G+AYGTAK+ TGIA+ +V P+L+MK+IIPVVM
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 254 XXXXXXXXXXXXQEP-ANYPLYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQP 430
+ ANY + F GL GL AG+AI I GDA VR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 431 XLFVGMILILIFAEVLGLYGLIVAIYL 511
+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 54.0 bits (124), Expect = 8e-08
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 311 LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYG 490
L ++ G GL V S L G A+ IVG + A P LFV +++I IFA +GL+G
Sbjct: 139 LASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFG 198
Query: 491 LIVAI 505
+I+ I
Sbjct: 199 MIIGI 203
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 332 LGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVA 502
LG G ++ S L AG+ I G + + G + P + ++ +IF E + ++G+I+A
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMA 110
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 54.0 bits (124), Expect = 8e-08
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 311 LYKXFIHLGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYG 490
L ++ G GL V S L G A+ IVG + A P LFV +++I IFA +GL+G
Sbjct: 139 LASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFG 198
Query: 491 LIVAI 505
+I+ I
Sbjct: 199 MIIGI 203
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 332 LGAGLAVRFSGLAAGFAICIVGDASVRGTAQQPXLFVGMILILIFAEVLGLYGLIVA 502
LG G ++ S L AG+ I G + + G + P + ++ +IF E + ++G+I+A
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMA 110
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 511 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLLSSTTHACISHDAYGETGSQTRE 356
++DG++ K + K KNH+D E LL ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 511 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLLSSTTHACISHDAYGE 377
++DG++ K + K KNH+D E LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 511 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLLSSTTHACISHDAYGE 377
++DG++ K + K KNH+D E LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 2.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 211 VDHSCRHGGYYCHLXXGRGCPDCWCP 288
V H C +GG+ + R P C CP
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICP 1825
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
Frame = +1
Query: 244 CHLXXGR-GCPDCWCPPRASQLPP 312
C L R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical
protein C48B4.7 protein.
Length = 159
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Frame = +2
Query: 422 QQPXLFVGMILILI-----FAEVLGLYGLIVAIYLY 514
Q+ +FV M+L+L+ F LG YG ++AI+ Y
Sbjct: 48 QEEIVFVAMVLLLVFTISSFVAFLGEYGTMMAIHYY 83
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 418 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQXVDGN 242
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 241 N 239
N
Sbjct: 630 N 630
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 418 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQXVDGN 242
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 570 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 629
Query: 241 N 239
N
Sbjct: 630 N 630
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 418 STTHACISHD-AYGETGSQTRESYSQTSTQVDEPFVKGVVGWLLEGTSNQDSHDQXVDGN 242
S H + D Y ET SQT + + T V E N+D D +
Sbjct: 609 SAIHTVVKSDWNYSETSSQTEKPFDPTDGPPSYEIANSFVQIAFENEQNEDHFDTEISRQ 668
Query: 241 N 239
N
Sbjct: 669 N 669
>Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical
protein ZC302.3 protein.
Length = 236
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -2
Query: 490 SVKTQYFSENKNKNHSDE*XRLLSSTTHACISHDAYG--ETGSQTRESYSQTSTQVDEPF 317
S++T+Y + N+N S +L+ A + +AY + R+ + + ++D F
Sbjct: 154 SLQTEYLNYKANRNDSRSPSQLVKKIKDATMKAEAYEFFMDDKRVRKVIGELN-EIDSKF 212
Query: 316 VKGVVGWLLE 287
+ + WLL+
Sbjct: 213 KENIGAWLLQ 222
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 223 CRHGGYYCHLXXGRGCPDCWCPPRASQ 303
C HG Y ++ G GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,081,088
Number of Sequences: 27780
Number of extensions: 264511
Number of successful extensions: 802
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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