Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32249
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.55 
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   3.9  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   3.9  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          20   9.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   9.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 0.55
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 112 LSNTETLFGSRPVRTKAARAIRLMPWTRL 26
           L+ TE +FG++     A R I  + W++L
Sbjct: 107 LTETELVFGAKLAWRNATRCIGRIQWSKL 135


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 158 RKLLKTILLPRPPIEFVKH 102
           + L+ T+L PRP  E  K+
Sbjct: 24  QNLVNTVLQPRPSFELSKN 42


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 158 RKLLKTILLPRPPIEFVKH 102
           + L+ T+L PRP  E  K+
Sbjct: 26  QNLVNTVLQPRPSFELSKN 44


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 366 ELVDITGPSYHRDDAR 319
           EL +  G  +H DDAR
Sbjct: 112 ELTNRKGVVFHHDDAR 127


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 97  FQCLTNSIGGLGRSI 141
           + C  +SIGG+ R I
Sbjct: 472 YMCQASSIGGITRDI 486


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,235
Number of Sequences: 438
Number of extensions: 1945
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)