Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32246
(300 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 64 3e-11
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 64 3e-11
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 64 3e-11
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 64 3e-11
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 64 3e-11
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 61 1e-10
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 61 2e-10
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 60 3e-10
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 60 4e-10
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 58 1e-09
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 58 1e-09
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 54 3e-08
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 39 6e-04
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 36 0.006
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 36 0.006
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 36 0.006
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 35 0.010
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 33 0.055
02_03_0235 - 16702768-16702956,16703956-16704492,16705084-167052... 29 0.89
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 28 1.6
10_01_0198 - 2158139-2158334,2158517-2158641,2158736-2158789,215... 27 2.7
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 27 2.7
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 26 4.7
01_07_0240 - 42227132-42227245,42227332-42227394,42227484-422275... 26 6.3
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 25 8.3
04_04_0016 - 22167780-22167873,22167978-22168272,22168380-221684... 25 8.3
03_02_0583 + 9635002-9637299 25 8.3
02_05_1169 + 34656450-34656603,34657321-34657481,34657907-346579... 25 8.3
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 63.7 bits (148), Expect = 3e-11
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EMRIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 139 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 173
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 63.7 bits (148), Expect = 3e-11
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EMRIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 63.7 bits (148), Expect = 3e-11
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EMRIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 63.7 bits (148), Expect = 3e-11
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EMRIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 63.7 bits (148), Expect = 3e-11
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EMRIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 61.3 bits (142), Expect = 1e-10
Identities = 27/34 (79%), Positives = 33/34 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTI 297
+EMRIL++GLD AGKTTILYKL++GE+VTTIPTI
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 60.9 bits (141), Expect = 2e-10
Identities = 25/35 (71%), Positives = 33/35 (94%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EMR+++LGLD AGKTTILYKL +GEV++T+PTIG
Sbjct: 16 KEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIG 50
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 60.1 bits (139), Expect = 3e-10
Identities = 25/34 (73%), Positives = 32/34 (94%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
EMR+++LGLD AGKTTILYKL +GEV++T+PTIG
Sbjct: 17 EMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIG 50
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 59.7 bits (138), Expect = 4e-10
Identities = 24/35 (68%), Positives = 33/35 (94%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
REMR+++LGLD AGKTTILY+L +GEV++T+PT+G
Sbjct: 16 REMRVVMLGLDAAGKTTILYRLHMGEVLSTVPTVG 50
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 58.4 bits (135), Expect = 1e-09
Identities = 24/35 (68%), Positives = 33/35 (94%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EM++L+LGLD AGKTTILY+L +GEV+++IPTIG
Sbjct: 15 KEMKVLMLGLDAAGKTTILYRLHIGEVLSSIPTIG 49
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 58.0 bits (134), Expect = 1e-09
Identities = 26/33 (78%), Positives = 31/33 (93%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPT 294
RE RIL+LGLD AGKTTILY+LQ+GEVV+TIP+
Sbjct: 16 REARILVLGLDNAGKTTILYRLQMGEVVSTIPS 48
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 53.6 bits (123), Expect = 3e-08
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +1
Query: 193 AREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
A+E +I+++GLD AGKTT LYKL +GE VT PTIG
Sbjct: 15 AKEYKIVVVGLDNAGKTTTLYKLHLGEAVTAAPTIG 50
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 39.1 bits (87), Expect = 6e-04
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+EMRIL++GLD +GKTTI+ K+ + PT+G
Sbjct: 15 KEMRILMVGLDNSGKTTIVLKINGEDTGVISPTLG 49
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPT 294
+E +IL LGLD AGKTT+L+ L+ +V PT
Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPT 294
+E +IL LGLD AGKTT+L+ L+ +V PT
Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPT 294
+E +IL LGLD AGKTT+L+ L+ +V PT
Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 51
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 35.1 bits (77), Expect = 0.010
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPT 294
+E +IL LGLD AGKTT+ Y L + PT
Sbjct: 20 KEAKILFLGLDNAGKTTLFYMLSQENLAVHQPT 52
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 32.7 bits (71), Expect = 0.055
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 7/41 (17%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTILYKLQ----VGEVVT---TIPTIG 300
E +LILG+D AGKTT+L K++ GE +T +PT+G
Sbjct: 17 EFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVG 57
>02_03_0235 -
16702768-16702956,16703956-16704492,16705084-16705233,
16705310-16705625,16707005-16707286,16707895-16707971,
16708121-16708186,16708700-16709246,16709435-16709565,
16709642-16709746,16709859-16710039,16710123-16710185,
16711000-16711109,16711576-16711638,16711859-16712191
Length = 1049
Score = 28.7 bits (61), Expect = 0.89
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKL 261
R R+ +LGL+GAGKT++L L
Sbjct: 748 RTRRVRLLGLEGAGKTSLLKAL 769
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEV-VTTIPTIG 300
+EM + ++GL AGKT+++ + G IPT+G
Sbjct: 18 QEMELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVG 53
>10_01_0198 -
2158139-2158334,2158517-2158641,2158736-2158789,
2159038-2159342,2159677-2159860,2159908-2159999,
2161777-2161885
Length = 354
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTILYKLQVGEVVTTIP-TIG 300
++R+L++G G GK+++++ + G + P TIG
Sbjct: 27 QVRVLVVGDSGVGKSSLVHLILKGSAIARPPQTIG 61
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 27.1 bits (57), Expect = 2.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTILYKLQ 264
E ++ILG+ AGKTT+L K++
Sbjct: 150 EFHVVILGVHKAGKTTLLEKVK 171
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 208 ILILGLDGAGKTTILYKLQVG 270
I++ GL G+GKT + Y+L+ G
Sbjct: 55 IVLSGLSGSGKTILFYQLRDG 75
>01_07_0240 -
42227132-42227245,42227332-42227394,42227484-42227552,
42227716-42227798,42228056-42228176,42228335-42228372,
42228932-42228990,42229076-42229149,42229241-42229753
Length = 377
Score = 25.8 bits (54), Expect = 6.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 208 ILILGLDGAGKTTILYKL 261
I+I+G++G GKTT L KL
Sbjct: 201 IMIVGVNGGGKTTSLGKL 218
>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
Length = 1125
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 208 ILILGLDGAGKTTI 249
I ILGL GAGKTT+
Sbjct: 289 ICILGLPGAGKTTL 302
>04_04_0016 -
22167780-22167873,22167978-22168272,22168380-22168455,
22168665-22168853,22168955-22169176,22169315-22169413,
22169502-22169582,22169753-22170060,22171611-22171950,
22172047-22172110,22172191-22172412,22172865-22173043
Length = 722
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 131 IKLSLSIKWVVYLVTLX-DCWVQGKCGF*YLDWTVPERRQ 247
I++S + +V L+T+ C CGF YL T+P R+
Sbjct: 188 IRVSYLLTRIVKLITVELYCTHTAACGFYYLATTLPPARE 227
>03_02_0583 + 9635002-9637299
Length = 765
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Frame = +1
Query: 193 AREMRIL-ILGLDGAGKTTIL 252
ARE I+ +LG GAGKTT++
Sbjct: 139 AREGEIMAVLGASGAGKTTLI 159
>02_05_1169 +
34656450-34656603,34657321-34657481,34657907-34657958,
34658289-34658425,34658775-34658861,34658939-34659226
Length = 292
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 205 RILILGLDGAGKTTILYKLQVGE 273
R L++G +G+GKTT+L K+ G+
Sbjct: 42 RCLLIGANGSGKTTLL-KILAGK 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,778,558
Number of Sequences: 37544
Number of extensions: 130606
Number of successful extensions: 368
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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