Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32246
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 73 3e-14
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 65 1e-11
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 62 7e-11
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 62 7e-11
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 60 3e-10
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 56 4e-09
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 42 8e-05
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 42 8e-05
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 41 1e-04
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 39 8e-04
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 34 0.016
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 34 0.016
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 28 1.1
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 28 1.1
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 28 1.4
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 27 3.3
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 27 3.3
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 27 3.3
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 26 4.4
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 26 4.4
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 26 4.4
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 26 4.4
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 26 4.4
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 26 5.8
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 26 5.8
U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alph... 26 5.8
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 26 5.8
AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeri... 26 5.8
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical pr... 25 7.6
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 25 7.6
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 25 7.6
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 25 7.6
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 25 7.6
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 25 7.6
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 25 7.6
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 73.3 bits (172), Expect = 3e-14
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 193 AREMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
AREMRILILGLDGAGKTTILY+LQVGEVVTTIPTIG
Sbjct: 14 AREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIG 49
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 64.9 bits (151), Expect = 1e-11
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
REMRIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 62.1 bits (144), Expect = 7e-11
Identities = 27/35 (77%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
R++RIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 16 RQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 62.1 bits (144), Expect = 7e-11
Identities = 27/35 (77%), Positives = 34/35 (97%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
R++RIL++GLD AGKTTILYKL++GE+VTTIPTIG
Sbjct: 16 RQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG 50
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 60.1 bits (139), Expect = 3e-10
Identities = 26/35 (74%), Positives = 33/35 (94%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
+E+RIL+LGLD AGKTTILYKL++G+ VTTIPT+G
Sbjct: 12 KELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVG 46
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 56.4 bits (130), Expect = 4e-09
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
E R L+LGLDGAGKTTILYKL++ E V TIPTIG
Sbjct: 17 ECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIG 50
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 41.9 bits (94), Expect = 8e-05
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
RE+RIL+LGLD AGKTTIL +L +V PT G
Sbjct: 16 REIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKG 50
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 41.9 bits (94), Expect = 8e-05
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
REMRILILGLD AGKTT++ K T PT+G
Sbjct: 15 REMRILILGLDNAGKTTLMKKFLDEPTDTIEPTLG 49
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIPTIG 300
++ +I+++GLD AGKTTILY + V T PTIG
Sbjct: 16 KKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIG 50
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 38.7 bits (86), Expect = 8e-04
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTI---LYKLQVGEVVTTIPTIG 300
E R+++LGLDGAGKT+I L K+Q+ V+ PTIG
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIG 405
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 34.3 bits (75), Expect = 0.016
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 2/37 (5%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVT--TIPTIG 300
+++ I+++GLD +GKTTIL +L+ E + +PT+G
Sbjct: 16 KDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVG 52
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.016
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 205 RILILGLDGAGKTTILYKLQVGEVVTTIPTI 297
+++ LGLD AGKTT+L+ L+ + +PT+
Sbjct: 23 KLVFLGLDNAGKTTLLHMLKDDRIAQHVPTL 53
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 205 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG 300
++L++G G GKT ILY+ TT I TIG
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIG 43
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 205 RILILGLDGAGKTTILYKLQVGEVVTT-IPTIG 300
++L++G G GKT ILY+ TT I TIG
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIG 43
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 27.9 bits (59), Expect = 1.4
Identities = 8/26 (30%), Positives = 21/26 (80%)
Frame = +1
Query: 202 MRILILGLDGAGKTTILYKLQVGEVV 279
++++ILG G GKT+++ + ++G+++
Sbjct: 10 LKVIILGDSGVGKTSLMNQYEIGDLM 35
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 205 RILILGLDGAGKTTILYKLQVG 270
++++LG G GKT+I+Y+ + G
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYG 75
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 26.6 bits (56), Expect = 3.3
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 205 RILILGLDGAGKTTILYKLQVG 270
++++LG G GKT+I+Y+ + G
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYG 75
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 26.6 bits (56), Expect = 3.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 202 MRILILGLDGAGKTTILYKLQ 264
+ +LG++GAGKTTI+ +L+
Sbjct: 33 IHFFMLGIEGAGKTTIVRQLK 53
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIP 291
R MR++++G GKT IL ++ E VT P
Sbjct: 168 RAMRVVVVGGKKVGKTAILRQVACVEDVTNKP 199
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIP 291
R MR++++G GKT IL ++ E VT P
Sbjct: 3 RAMRVVVVGGKKVGKTAILRQVACVEDVTNKP 34
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQVGEVVTTIP 291
R MR++++G GKT IL ++ E VT P
Sbjct: 168 RAMRVVVVGGKKVGKTAILRQVACVEDVTNKP 199
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 208 ILILGLDGAGKTTILYKL 261
IL+LG+ G+GKTT + +L
Sbjct: 33 ILVLGMAGSGKTTFVQRL 50
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 208 ILILGLDGAGKTTILYKL 261
IL+LG+ G+GKTT + +L
Sbjct: 33 ILVLGMAGSGKTTFVQRL 50
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTIL 252
++ ++I+GLD AGKTT L
Sbjct: 16 KDYYVVIVGLDNAGKTTFL 34
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 296 IVGIVVTTSPTCNL*RIVVFPAPSNP 219
I G T P CNL ++V P +NP
Sbjct: 973 ITGCCCTNGPNCNLNQVVPRPPINNP 998
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 296 IVGIVVTTSPTCNL*RIVVFPAPSNP 219
I G T P CNL ++V P +NP
Sbjct: 973 ITGCCCTNGPNCNLNQVVPRPPINNP 998
>U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alpha
subunit protein 5 protein.
Length = 385
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/24 (37%), Positives = 21/24 (87%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQV 267
R++++L+LG+ +GK+TI+ +++V
Sbjct: 32 RKIKMLLLGVTDSGKSTIVKQMRV 55
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 205 RILILGLDGAGKTTIL 252
RI I+G +GAGKTT+L
Sbjct: 525 RICIVGENGAGKTTLL 540
>AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 385
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/24 (37%), Positives = 21/24 (87%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQV 267
R++++L+LG+ +GK+TI+ +++V
Sbjct: 32 RKIKMLLLGVTDSGKSTIVKQMRV 55
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/25 (32%), Positives = 21/25 (84%)
Frame = +1
Query: 193 AREMRILILGLDGAGKTTILYKLQV 267
A+++++L+LG +GK+TI+ ++++
Sbjct: 31 AKDIKLLLLGAGESGKSTIVKQMKI 55
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTILYKL 261
+ +++LG +G+GKTT + KL
Sbjct: 501 KQHVMVLGGNGSGKTTFIKKL 521
>Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical
protein T14G10.1 protein.
Length = 652
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQ 264
R I GL GAGKTTI + L+
Sbjct: 55 RGCTIWFTGLSGAGKTTISFALE 77
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQV 267
RE+++L+LG +GK+T + ++++
Sbjct: 32 RELKLLLLGTGESGKSTFIKQMRI 55
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/25 (32%), Positives = 21/25 (84%)
Frame = +1
Query: 193 AREMRILILGLDGAGKTTILYKLQV 267
A+++++L+LG +GK+TI+ ++++
Sbjct: 31 AKDIKLLLLGAGESGKSTIVKQMKI 55
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/25 (32%), Positives = 21/25 (84%)
Frame = +1
Query: 193 AREMRILILGLDGAGKTTILYKLQV 267
A+++++L+LG +GK+TI+ ++++
Sbjct: 31 AKDIKLLLLGAGESGKSTIVKQMKI 55
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQV 267
RE+++L+LG +GK+T + ++++
Sbjct: 32 RELKLLLLGTGESGKSTFIKQMRI 55
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 25.4 bits (53), Expect = 7.6
Identities = 8/24 (33%), Positives = 19/24 (79%)
Frame = +1
Query: 196 REMRILILGLDGAGKTTILYKLQV 267
RE+++L+LG +GK+T + ++++
Sbjct: 32 RELKLLLLGTGESGKSTFIKQMRI 55
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 199 EMRILILGLDGAGKTTILYKL 261
+ +++LG +G+GKTT + KL
Sbjct: 501 KQHVMVLGGNGSGKTTFIKKL 521
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,079,697
Number of Sequences: 27780
Number of extensions: 127471
Number of successful extensions: 356
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 356
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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