Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32243
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 215 3e-57
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 113 2e-26
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 105 3e-24
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 105 6e-24
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 73 3e-14
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 67 2e-12
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 46 4e-06
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 45 6e-06
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 37 0.002
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.005
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.11
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.34
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.59
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 0.78
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 28 1.0
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 28 1.0
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 1.8
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 27 1.8
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 2.4
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 27 2.4
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 2.4
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 2.4
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 26 3.2
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 4.2
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 25 5.5
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.5
SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr 1... 25 7.3
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 25 7.3
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 9.6
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 25 9.6
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 25 9.6
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 215 bits (526), Expect = 3e-57
Identities = 100/133 (75%), Positives = 117/133 (87%)
Frame = +3
Query: 3 FSLFDKYGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 182
FSLFD+ DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTIDF EFLTMMARK
Sbjct: 18 FSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARK 77
Query: 183 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 362
MKDTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +MIREAD DGDG
Sbjct: 78 MKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGV 137
Query: 363 VNYEEFVTMMTSK 401
+NYEEF +++SK
Sbjct: 138 INYEEFSRVISSK 150
Score = 68.5 bits (160), Expect = 6e-13
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 168 MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADI 347
M R + D + E REAF +FD+D +G I++ EL VM +LG+ T E+ +MI E D
Sbjct: 1 MTTRNLTD-EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDA 59
Query: 348 DGDGQVNYEEFVTMMTSK 401
DG+G +++ EF+TMM K
Sbjct: 60 DGNGTIDFTEFLTMMARK 77
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 113 bits (272), Expect = 2e-26
Identities = 58/133 (43%), Positives = 85/133 (63%)
Frame = +3
Query: 3 FSLFDKYGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 182
F L+D DG I T +G+V+RSLG N T+AEL + NE+ ID +F++ ++ K
Sbjct: 15 FVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAIDEKKFMSFVSNK 70
Query: 183 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 362
+++T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M++EAD G
Sbjct: 71 LRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGS 130
Query: 363 VNYEEFVTMMTSK 401
+Y +FV + +K
Sbjct: 131 FDYYDFVQRIMAK 143
Score = 37.1 bits (82), Expect = 0.002
Identities = 19/69 (27%), Positives = 43/69 (62%)
Frame = +3
Query: 195 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 374
+ +E++EAF ++D D +G I + + V+ +LG +TD E+ ++ E GD ++ +
Sbjct: 6 EQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL---GDA-IDEK 61
Query: 375 EFVTMMTSK 401
+F++ +++K
Sbjct: 62 KFMSFVSNK 70
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 105 bits (253), Expect = 3e-24
Identities = 55/132 (41%), Positives = 86/132 (65%), Gaps = 2/132 (1%)
Frame = +3
Query: 3 FSLFDKYGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 182
FSLFD++G G I +G ++R+ GQNPT AE+ ++ + + A+ +D +FL ++ R
Sbjct: 12 FSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQVLNRP 67
Query: 183 MK-DTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 356
D + EE + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++ + D
Sbjct: 68 NGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-D 126
Query: 357 GQVNYEEFVTMM 392
G VNY +FV M+
Sbjct: 127 GMVNYHDFVQMI 138
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +3
Query: 213 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 392
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + +V+ E+F+ ++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTL--PAEVDMEQFLQVL 64
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 105 bits (251), Expect = 6e-24
Identities = 50/130 (38%), Positives = 75/130 (57%)
Frame = +3
Query: 3 FSLFDKYGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 182
F LFD D I EL MR+LG N ++E+ ++ + D G G + +F+ +M K
Sbjct: 43 FKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEK 102
Query: 183 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 362
+ + D EEI+ AF +FD D G IS LR V L E + D+E++ MI E D+D DG+
Sbjct: 103 IVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGE 162
Query: 363 VNYEEFVTMM 392
+N +EF+ +M
Sbjct: 163 INEQEFIAIM 172
Score = 52.0 bits (119), Expect = 6e-08
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +3
Query: 195 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 374
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 375 EFVTMMTSK 401
+FV +MT K
Sbjct: 94 DFVRVMTEK 102
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 72.9 bits (171), Expect = 3e-14
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 5/131 (3%)
Frame = +3
Query: 3 FSLFDKYGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 182
F D G+I E ++ S+ NP + L + VD DG G +DF EF+ ++
Sbjct: 30 FIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVDFQEFINSLSVF 85
Query: 183 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADI 347
+ EE+++ AF+++D D +G+IS EL V+ TNL E + VD+ I E D
Sbjct: 86 SVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDK 145
Query: 348 DGDGQVNYEEF 380
D DG++++EEF
Sbjct: 146 DRDGKISFEEF 156
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 66.9 bits (156), Expect = 2e-12
Identities = 39/127 (30%), Positives = 67/127 (52%)
Frame = +3
Query: 3 FSLFDKYGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 182
F+L DK GDG I +++ T++ SL Q+ +E D IN + N I+ FLT M
Sbjct: 54 FALLDKDGDGNIGREDVKTMLTSLNQDASE----DSINHMFESINPPINLAAFLTAMGSM 109
Query: 183 MKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 362
+ ++ EAF FD +G I + +R ++++G+++ +EV+ ++R G
Sbjct: 110 LCRISPRNDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILR--SYTSHGV 167
Query: 363 VNYEEFV 383
YE+FV
Sbjct: 168 FYYEKFV 174
Score = 39.9 bits (89), Expect = 2e-04
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +3
Query: 204 EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 383
+E++EAF + DKDG+G I +++ ++T+L + +++ ++ M + +N F+
Sbjct: 48 QELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESI----NPPINLAAFL 103
Query: 384 TMMTS 398
T M S
Sbjct: 104 TAMGS 108
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 96 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF 224
EL++ +D DG+G I + TM+ +D SE+ I F
Sbjct: 49 ELKEAFALLDKDGDGNIGREDVKTMLTSLNQDA-SEDSINHMF 90
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 46.0 bits (104), Expect = 4e-06
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 171 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 350
M+ K + +EE EAF +FD G+I +LR LGE LT E++ M+ D+
Sbjct: 1 MSVSTKRLEMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLA 57
Query: 351 G-DGQVNYEEFVTM 389
G +G+V+ EEF +
Sbjct: 58 GTNGKVSREEFAEL 71
Score = 28.7 bits (61), Expect = 0.59
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 3 FSLFDKYGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 161
F LFD G I ++L LG+N T+ +LQ M++ A NG + EF
Sbjct: 18 FDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSREEF 68
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 45.2 bits (102), Expect = 6e-06
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Frame = +3
Query: 108 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHV-- 281
+ N DAD NG IDF EF+ ++ + + +++ AF+++D D NG IS E+ +
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRG-ELNDKLIWAFQLYDLDNNGLISYDEMLRIVD 126
Query: 282 ----MTNLGEKLTDEE------VDEMIREADIDGDGQVNYEEF 380
M KL ++E V+++ D + DGQ+ EEF
Sbjct: 127 AIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEF 169
Score = 31.1 bits (67), Expect = 0.11
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +3
Query: 135 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 314
+G ++ EF + + D F VFD D NG+I E ++ ++
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 315 EVDEMIREADIDGDGQVNYEEFVTMM 392
++ + D+D +G ++Y+E + ++
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIV 125
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 36.7 bits (81), Expect = 0.002
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 99 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 278
L D N++D DG G +D P T+ A + S +E+REA R + D +G + +
Sbjct: 21 LTDQFNKLDVDGKGYLDQP--TTIKAFEDSKKGSYDEVREAIREVNVDSSGRVEPEDFVG 78
Query: 279 VMTNLGEKLTDEEV 320
+ L + + EV
Sbjct: 79 IFNVLKKGVEGTEV 92
Score = 35.9 bits (79), Expect = 0.004
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 171 MARKMKDTDSEE--EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 344
+ +K + +EE + + F D DG G++ + +K + +EV E IRE +
Sbjct: 6 LQKKYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVN 64
Query: 345 IDGDGQVNYEEFV 383
+D G+V E+FV
Sbjct: 65 VDSSGRVEPEDFV 77
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.005
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +3
Query: 189 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 368
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 369 YEEFVTMM 392
++EF M
Sbjct: 59 FDEFAIAM 66
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.11
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -2
Query: 356 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 222
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.34
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -2
Query: 356 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 210
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 28.7 bits (61), Expect = 0.59
Identities = 18/81 (22%), Positives = 35/81 (43%)
Frame = +3
Query: 93 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAEL 272
A +++ V + N ID E + K+ + ++ E V +DG+ I+ E
Sbjct: 318 ARYNELVQAVSSSSNSEIDEVEDAETIDSKILEKRNDLNNEEPNSVVAEDGSEIITLDEN 377
Query: 273 RHVMTNLGEKLTDEEVDEMIR 335
EKL D +++E ++
Sbjct: 378 DQSPNEATEKLRDNDLEESLK 398
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 28.3 bits (60), Expect = 0.78
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 111 INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 239
I+E D + NG + F + + +KD+ EE+ ++F + D+
Sbjct: 545 ISESDDESNGDMIRDSFDRLSSESIKDSQKTEELHDSFGINDE 587
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/53 (20%), Positives = 20/53 (37%)
Frame = +2
Query: 29 WHHHDQRAGHRDEVARTEPHRSRTSRHDQ*SRRGRKRHDRLSRVLDNDGAQDE 187
W H + + H D+ R PH H H + R + ++G + +
Sbjct: 252 WKHEEHCSCHHDKFPRPVPHNGTKPDHKPWKHEEHCHHGKFPRPIPHNGTKPD 304
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = +2
Query: 29 WHHHDQRAGHRDEVARTEPHRSRTSRHD--Q*SRRGRKRHDRLSRVLDNDGAQDE 187
W H + + H D+ R PH H + HD+ R + ++G + +
Sbjct: 223 WKHEEHCSCHHDKFPRPVPHNGTKPDHKPWKHEEHCSCHHDKFPRPVPHNGTKPD 277
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/43 (23%), Positives = 15/43 (34%)
Frame = +2
Query: 29 WHHHDQRAGHRDEVARTEPHRSRTSRHDQ*SRRGRKRHDRLSR 157
W H + + H D+ +R PH H H + R
Sbjct: 335 WKHEEHCSCHHDKFSRPVPHNGTKPDHKPWKHEEHCHHGKFLR 377
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 488 SNTMLILCVMKQNVYLNSLLFTHTLAGGSLRRHHGDE 378
S T+L + +M QN +LN+ F H A + R+ + +E
Sbjct: 199 SQTVLEILLMNQNSFLNNFNFEHIKADFAFRQKNYEE 235
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 279 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 377
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +3
Query: 174 ARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 350
AR++K I + ++ D+ + +A EL V LG+ +TD VDE +A+++
Sbjct: 113 ARQLKSQSKNVSIEKIEKLQDEIQDYMDAAGELNEV---LGQNMTDINVDEEELDAELE 168
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 231 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 344
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = -2
Query: 446 YLNSLLFTHTLAGGSLRRHHGDELFVIDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 267
Y L T+ G + E+ I+ V DIG + + +F + D +L
Sbjct: 172 YCKRLAPTYETLGKVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDKPEL 231
Query: 266 GRGDEAVAVLVE 231
GD ++ L+E
Sbjct: 232 YEGDRSLESLIE 243
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 2.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 105 LEVRLLWGSVLATSSRCPALWS*WCHR 25
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 231 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 344
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 33 TITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE 209
T + GT+ S+G + E + ++++ T DFPE L+ +++ EE
Sbjct: 545 TTSLHPFGTLYESIGTIGDPKVEYKAILHDFSCH---TYDFPESLSHCVKRLPTPIPAEE 601
Query: 210 IREAFRVFDK 239
+++ + + DK
Sbjct: 602 LQKRYNLRDK 611
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 368 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 267
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 26 RWHHHDQRAGHRDEVARTEPHRSRTSRHDQ*SRRGRKRHDRLSR 157
R H+D + + DE+ R SR + RR RHD R
Sbjct: 215 RRRHYDSYSSY-DELERRRSSNESYSRRSELPRRDYNRHDERER 257
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 446 YLNSLLFTHTLAGGSLRRHHGDELFVIDLAVAV 348
YLNSLL H G L++ H + LAVA+
Sbjct: 299 YLNSLLSVHEKDGVLLQKFHNSYVQYQKLAVAL 331
>SPAC24H6.04 |hxk1||hexokinase 1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 484
Score = 25.0 bits (52), Expect = 7.3
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 120 VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE 299
V DG+ +P F +A+ KD EE + + +DG+G A L + G+
Sbjct: 414 VGTDGSVYNLYPRFKDRLAQAFKDILGEEIGSKVVTIPAEDGSGV--GAALVSALEAKGK 471
Query: 300 KLTDEEVDEMIR 335
LT + + E ++
Sbjct: 472 ALTSDILAEHLK 483
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/38 (23%), Positives = 19/38 (50%)
Frame = +3
Query: 105 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIRE 218
D + + + T + PE + ++ K+KD + E + E
Sbjct: 479 DCLEVLQISVDDTSNIPEIIARLSEKLKDREESEAVTE 516
>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 783
Score = 24.6 bits (51), Expect = 9.6
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 90 EAELQDMINEVDADGNGTIDFPEFLT--MMARKMKDTDSEEEIREAFRVFDKDGNGFISA 263
E L+ +N + + N ++D P FL MM + + EIR A FD G F
Sbjct: 281 ETLLRYRLNLIMSFQNPSVD-PGFLCLLMMIFALGSMFAHMEIRSASNPFDNPGKQFFDT 339
Query: 264 AEL 272
A L
Sbjct: 340 ARL 342
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 24.6 bits (51), Expect = 9.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 32 HHHDQRAGHRDEVARTEPHRSRTSRHDQ*SRRGRKRH 142
HHH GH D + +RTS Q SR+ RH
Sbjct: 1307 HHHHHNEGHADSSS------TRTSLAHQDSRKSLHRH 1337
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 24.6 bits (51), Expect = 9.6
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 20 IRRWHHHDQRAGHRDEVARTEPHRSRTSRHDQ*SRRGRKRHDRLSRVLDNDG 175
++R D+R R+ R HR R RR +R ++ DNDG
Sbjct: 85 VQRQLEEDERCA-RELANRYNSHRPERRRKTNNDRRNYPPQNRTAKPNDNDG 135
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -2
Query: 524 VFNLSQTLEKCRSNTMLILCVMKQNVYLNSLLFTHTL 414
+FNLS+ ++ N ML + + Q+ +NS+L T+
Sbjct: 237 LFNLSKGAQQSYGNQMLSVNLRPQDFDMNSVLTASTM 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,819,018
Number of Sequences: 5004
Number of extensions: 31648
Number of successful extensions: 159
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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