Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32239
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 59 2e-09
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 54 3e-08
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 48 3e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 48 3e-06
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 46 1e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 45 2e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 45 2e-05
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 5e-05
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 44 6e-05
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 44 6e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 43 8e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 43 8e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 1e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 1e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 41 4e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 41 4e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 40 7e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 39 0.002
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 38 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.005
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.005
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 36 0.012
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.016
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 34 0.037
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 34 0.037
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 34 0.037
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 34 0.049
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 34 0.049
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 33 0.065
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.065
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 33 0.065
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.065
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 32 0.15
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 32 0.15
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 31 0.26
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 31 0.35
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 0.35
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 30 0.80
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 30 0.80
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 29 1.1
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 1.1
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 29 1.1
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 1.4
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 1.4
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 1.8
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 29 1.8
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 28 2.4
L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human nie... 28 3.2
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 27 4.3
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 27 4.3
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 27 4.3
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 26 9.8
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 26 9.8
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 26 9.8
U58756-5|AAY44006.1| 288|Caenorhabditis elegans Hypothetical pr... 26 9.8
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 26 9.8
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 26 9.8
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 26 9.8
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 26 9.8
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 26 9.8
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 26 9.8
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 26 9.8
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/95 (32%), Positives = 48/95 (50%)
Frame = +1
Query: 124 SKSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVH 303
SK GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTID 61
Query: 304 GQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPE 408
G+ + I+ + S+ P+ +D+ R P+
Sbjct: 62 GKVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/95 (32%), Positives = 48/95 (50%)
Frame = +1
Query: 124 SKSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVH 303
SK GNL D L+ +F+ + V ECDIV+NY FVH+E + V I L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTID 61
Query: 304 GQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPE 408
G+ + I+ + S+ P+ +D+ R P+
Sbjct: 62 GKVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 54.4 bits (125), Expect = 3e-08
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDI--VRNYGFVHMENEQVGREAIQNLNGELVHGQA 312
GN+S +TT+ADLR LF YG + E I + Y FV E ++ +AI +NG+ + G
Sbjct: 242 GNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGNQ 301
Query: 313 IKIEAAKSRXXPS 351
++ +++ P+
Sbjct: 302 VRCSWGRTQAVPN 314
Score = 41.5 bits (93), Expect = 2e-04
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 23/118 (19%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G+LS + L+ F K+G V E ++R+ YGFV N+Q AI +NG+
Sbjct: 140 GDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGK 199
Query: 295 LVHGQAIKIE-AAKSRXXPS--------------TPTTKIFVGNLTDKTRAPEVRELF 423
+ +A++ AA+ + T ++VGN++ +T ++R+LF
Sbjct: 200 WIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLF 257
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVH 303
N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q L+G ++
Sbjct: 159 NIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIE 218
Query: 304 GQAIKIEAAKSR 339
G+ I++ A +R
Sbjct: 219 GRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVH 303
N+ + + DL+ +FEK+G V + +I+ N +GFV ME Q A Q L+G ++
Sbjct: 159 NIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIE 218
Query: 304 GQAIKIEAAKSR 339
G+ I++ A +R
Sbjct: 219 GRKIEVNCATAR 230
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 45.6 bits (103), Expect = 1e-05
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Frame = +1
Query: 154 KTTEADLRPLFEKYGTVVECDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 309
KTT+ + FE GTVV C+I R +GFV M + VG + + + ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240
Query: 310 AIKIEAAKSRXXPSTPT-TKIFVGNLTDKTRAPEVRELF 423
++ R P+ ++IFVG LTDK ++R++F
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVF 279
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Frame = +1
Query: 109 RAPVLSKSSFGNLSDKTTEA-----DLRPLFEKYGTVVECDIV-------RNYGFVHMEN 252
R P + +S GN+ K + + F +G ++ C + + YGFVH E
Sbjct: 47 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 106
Query: 253 EQVGREAIQNLNGELVHGQAIKI-----EAAKSRXXPSTPT--TKIFVGNLTDKTRAPEV 411
E+ + AIQ +NG L+ G+ + + A ++R T T ++V N D +
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 166
Query: 412 RELF 423
+LF
Sbjct: 167 EKLF 170
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNGELVH 303
N D + L LF K+G + C+++ + +GFV N + A+Q L+ +
Sbjct: 156 NFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIE 215
Query: 304 GQAIKIEAAKSR 339
G +K+ +++
Sbjct: 216 GTDLKLHVCRAQ 227
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Frame = +1
Query: 109 RAPVLSKSSFGNLSDKTTEA-----DLRPLFEKYGTVVECDIV-------RNYGFVHMEN 252
R P + +S GN+ K + + F +G ++ C + + YGFVH E
Sbjct: 110 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 169
Query: 253 EQVGREAIQNLNGELVHGQAIKI-----EAAKSRXXPSTPT--TKIFVGNLTDKTRAPEV 411
E+ + AIQ +NG L+ G+ + + A ++R T T ++V N D +
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 412 RELF 423
+LF
Sbjct: 230 EKLF 233
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNGELVH 303
N D + L LF K+G + C+++ + +GFV N + A+Q L+ +
Sbjct: 219 NFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIE 278
Query: 304 GQAIKIEAAKSR 339
G +K+ +++
Sbjct: 279 GTDLKLHVCRAQ 290
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/67 (25%), Positives = 39/67 (58%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIK 318
G L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G+ +
Sbjct: 8 GRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVI 67
Query: 319 IEAAKSR 339
++ +K R
Sbjct: 68 LDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/67 (25%), Positives = 39/67 (58%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIK 318
G L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G+ +
Sbjct: 8 GRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVI 67
Query: 319 IEAAKSR 339
++ +K R
Sbjct: 68 LDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/67 (25%), Positives = 39/67 (58%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIK 318
G L+ + +E D+ F YG + + + +GFV ++++ +A+ +LNG+ + G+ +
Sbjct: 8 GRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVI 67
Query: 319 IEAAKSR 339
++ +K R
Sbjct: 68 LDYSKPR 74
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.0 bits (99), Expect = 5e-05
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Frame = +1
Query: 109 RAPVLSKSSFGNLSDKTTEA-----DLRPLFEKYGTVVECDIV-------RNYGFVHMEN 252
R P + +S GN+ K + + F +G ++ C + + YGFVH E
Sbjct: 110 RDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFET 169
Query: 253 EQVGREAIQNLNGELVHGQAIKI-----EAAKSRXXPSTPT--TKIFVGNLTDKTRAPEV 411
E+ + AIQ +NG L+ G+ + + A ++R T T ++V N D +
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 412 RELF 423
++F
Sbjct: 230 EKVF 233
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNGELVH 303
N D + L +F K+G + C+++ + +GFV N + A+Q L+ +
Sbjct: 219 NFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIE 278
Query: 304 GQAIKIEAAKSR 339
G +K+ +++
Sbjct: 279 GTDLKLHVCRAQ 290
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 43.6 bits (98), Expect = 6e-05
Identities = 16/65 (24%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNGELVHGQAI 315
GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G ++HG+ +
Sbjct: 121 GNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQV 180
Query: 316 KIEAA 330
++ A
Sbjct: 181 RVRFA 185
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 352 TPTTKIFVGNLTDKTRAPEVRELF 423
T ++FVGNL ++ + E++ELF
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELF 136
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 43.6 bits (98), Expect = 6e-05
Identities = 16/65 (24%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIV-RNYGFVHMENEQVGREAIQNLNGELVHGQAI 315
GNL ++ E +L+ LF +G + EC + + + F+ ++ A + ++G ++HG+ +
Sbjct: 121 GNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQV 180
Query: 316 KIEAA 330
++ A
Sbjct: 181 RVRFA 185
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 352 TPTTKIFVGNLTDKTRAPEVRELF 423
T ++FVGNL ++ + E++ELF
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELF 136
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 43.2 bits (97), Expect = 8e-05
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVH 303
N+ K E DL +FEK G VV+ +I+ N +GFV M+N A NG +
Sbjct: 106 NIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIE 165
Query: 304 GQAIKIEAAKSR 339
G+ +++ A R
Sbjct: 166 GRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 43.2 bits (97), Expect = 8e-05
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVH 303
N+ K E DL +FEK G VV+ +I+ N +GFV M+N A NG +
Sbjct: 106 NIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIE 165
Query: 304 GQAIKIEAAKSR 339
G+ +++ A R
Sbjct: 166 GRRVEVNLATQR 177
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +1
Query: 121 LSKSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAI 276
L+ NLS +TT DLR FE+YG + + I R+ +GFV + A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 277 QNLNGELVHGQAIKIEAAK 333
+G+LV G+ +++ AK
Sbjct: 78 DRTDGKLVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +1
Query: 121 LSKSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAI 276
L+ NLS +TT DLR FE+YG + + I R+ +GFV + A+
Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHAL 77
Query: 277 QNLNGELVHGQAIKIEAAK 333
+G+LV G+ +++ AK
Sbjct: 78 DRTDGKLVDGRELRVTLAK 96
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGE 294
GN+S +E +R +F K G V+ +V + YGF+ + Q AI+NLNG
Sbjct: 23 GNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGY 82
Query: 295 LVHGQAIKIEAA 330
+ G+ +++++A
Sbjct: 83 ELSGRILRVDSA 94
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENEQVGREA 273
K G + + E D R LFEKYG+V C+I+R+ F H ++ + A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 274 IQNLNGELVHGQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPEVRELF 423
+ N+ +++ G ++ K + K+F+G L+ K +RE+F
Sbjct: 116 LHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN 228
K G LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 229 YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRXXP 348
+GFV EN Q AI +NG + + +K++ R P
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENEQVGREA 273
K G + + E D R LFEKYG+V C+I+R+ F H ++ + A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 274 IQNLNGELVHGQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPEVRELF 423
+ N+ +++ G ++ K + K+F+G L+ K +RE+F
Sbjct: 116 LHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN 228
K G LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 229 YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRXXP 348
+GFV EN Q AI +NG + + +K++ R P
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENEQVGREA 273
K G + + E D R LFEKYG+V C+I+R+ F H ++ + A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 274 IQNLNGELVHGQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPEVRELF 423
+ N+ +++ G ++ K + K+F+G L+ K +RE+F
Sbjct: 116 LHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN 228
K G LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 229 YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRXXP 348
+GFV EN Q AI +NG + + +K++ R P
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 510
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENEQVGREA 273
K G + + E D R LFEKYG+V C+I+R+ F H ++ + A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 274 IQNLNGELVHGQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPEVRELF 423
+ N+ +++ G ++ K + K+F+G L+ K +RE+F
Sbjct: 116 LHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN 228
K G LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENEQVGREA 273
K G + + E D R LFEKYG+V C+I+R+ F H ++ + A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 274 IQNLNGELVHGQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPEVRELF 423
+ N+ +++ G ++ K + K+F+G L+ K +RE+F
Sbjct: 116 LHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN 228
K G LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENEQVGREA 273
K G + + E D R LFEKYG+V C+I+R+ F H ++ + A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 274 IQNLNGELVHGQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPEVRELF 423
+ N+ +++ G ++ K + K+F+G L+ K +RE+F
Sbjct: 116 LHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN 228
K G LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 40.7 bits (91), Expect = 4e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRNYG-----------FVHMENEQVGREA 273
K G + + E D R LFEKYG+V C+I+R+ F H ++ + A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 274 IQNLNGELVHGQAIKIEAAKSRXXPSTPTTKIFVGNLTDKTRAPEVRELF 423
+ N+ +++ G ++ K + K+F+G L+ K +RE+F
Sbjct: 116 LHNI--KVIEGMHHPVQ-MKPADTENRNERKLFIGQLSKKHNEENLREIF 162
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 127 KSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN 228
K G LS K E +LR +F K+G + +C ++R+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 229 YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRXXP 348
+GFV EN Q AI +NG + + +K++ R P
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 39.9 bits (89), Expect = 7e-04
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKI 321
N+ + TE L LF++Y ++ V++Y F+H +A++ NG+ + G ++
Sbjct: 383 NIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEA 442
Query: 322 EAAK 333
AK
Sbjct: 443 SLAK 446
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGEL 297
NLS TTE DLR +F ++G + +CD+V R +GF++ + A L
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 298 VHGQAIKIEAAKSRXXPSTPTTKIFVGN 381
+ G I+++ + ++ S PT ++G+
Sbjct: 142 LDGHKIRVDFSLTKRGHS-PTPGQYMGD 168
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/62 (24%), Positives = 36/62 (58%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIK 318
G L ++ ++ D+ F YG + + + +GFV ++++ +A+ +LNG+ + G+ +
Sbjct: 7 GRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVI 66
Query: 319 IE 324
+E
Sbjct: 67 LE 68
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIV------RNYGFVHMENEQVGREAIQNLNGELVH 303
N D + L LF K+G + C+++ + +GFV N + A+Q L+ +
Sbjct: 159 NFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIE 218
Query: 304 GQAIKIEAAKSR 339
G +K+ +++
Sbjct: 219 GTDLKLHVCRAQ 230
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.005
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ LN
Sbjct: 18 GGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMI 77
Query: 295 LVHGQAIKIEAAKSRXXPSTPTTKIFVGNL 384
++G+ IK+ A + IFVGNL
Sbjct: 78 KLYGKPIKVNKASAHEKNMDVGANIFVGNL 107
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.005
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ LN
Sbjct: 28 GGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMI 87
Query: 295 LVHGQAIKIEAAKSRXXPSTPTTKIFVGNL 384
++G+ IK+ A + IFVGNL
Sbjct: 88 KLYGKPIKVNKASAHEKNMDVGANIFVGNL 117
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.9 bits (79), Expect = 0.012
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 339
+FEK G VV+ +I+ N +GFV M+N A NG + G+ +++ A R
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.5 bits (78), Expect = 0.016
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Frame = +1
Query: 145 LSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGELV 300
L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A ++ L+
Sbjct: 248 LNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLI 307
Query: 301 HGQAIKIEAAKS 336
+ I ++ ++S
Sbjct: 308 DDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.5 bits (78), Expect = 0.016
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Frame = +1
Query: 145 LSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGELV 300
L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A ++ L+
Sbjct: 248 LNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLI 307
Query: 301 HGQAIKIEAAKS 336
+ I ++ ++S
Sbjct: 308 DDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.5 bits (78), Expect = 0.016
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Frame = +1
Query: 145 LSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGELV 300
L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A ++ L+
Sbjct: 179 LNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLI 238
Query: 301 HGQAIKIEAAKS 336
+ I ++ ++S
Sbjct: 239 DDRRIHVDFSQS 250
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 35.5 bits (78), Expect = 0.016
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +1
Query: 160 TEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGELVHGQAI 315
T+ ++R LF G + C +VR+ YGFV+ E+ A+ + NG + + I
Sbjct: 54 TQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTI 113
Query: 316 KIEAAK 333
K+ A+
Sbjct: 114 KVSYAR 119
Score = 34.7 bits (76), Expect = 0.028
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGREAIQNLNGELV 300
NLS T + L LF ++G +V I+R+ Y FV M N A+ +LNG +
Sbjct: 380 NLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNL 439
Query: 301 HGQAIKI 321
G+ +++
Sbjct: 440 AGKTLQV 446
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 34.3 bits (75), Expect = 0.037
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIV---------RNYGFVHMENEQVGREAIQNLNGE 294
NLS + L +F YG + D+ R YG+V +N + ++I++++G
Sbjct: 139 NLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMDGG 198
Query: 295 LVHGQAIKIEAAKSR 339
+ G A+ +E R
Sbjct: 199 QIDGMAVHVEMTIGR 213
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 34.3 bits (75), Expect = 0.037
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGELVHG 306
GNL E ++ +F KYG + DI G FV E+ + +A++ +G G
Sbjct: 14 GNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDG 73
Query: 307 QAIKIE 324
+ I++E
Sbjct: 74 RRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 34.3 bits (75), Expect = 0.037
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRNYG----FVHMENEQVGREAIQNLNGELVHG 306
GNL E ++ +F KYG + DI G FV E+ + +A++ +G G
Sbjct: 14 GNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDG 73
Query: 307 QAIKIE 324
+ I++E
Sbjct: 74 RRIRVE 79
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 33.9 bits (74), Expect = 0.049
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +1
Query: 184 FEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLNGELVHGQAIKI 321
F +G ++ C + + YGFVH E E + AI+ +NG L+ + + +
Sbjct: 165 FSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 33.9 bits (74), Expect = 0.049
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +1
Query: 184 FEKYGTVVECDIV-------RNYGFVHMENEQVGREAIQNLNGELVHGQAIKI 321
F +G ++ C + + YGFVH E E + AI+ +NG L+ + + +
Sbjct: 165 FSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 33.5 bits (73), Expect = 0.065
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G+LS + LR F+ +G V + ++R+ YGFV + AI+ +NG+
Sbjct: 27 GDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 86
Query: 295 LVHGQAIK 318
+ + I+
Sbjct: 87 WLGRRTIR 94
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.065
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G+LS + LR F+ +G V + ++R+ YGFV + AI+ +NG+
Sbjct: 37 GDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 96
Query: 295 LVHGQAIK 318
+ + I+
Sbjct: 97 WLGRRTIR 104
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 33.5 bits (73), Expect = 0.065
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G+LS + LR F+ +G V + ++R+ YGFV + AI+ +NG+
Sbjct: 140 GDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 199
Query: 295 LVHGQAIK 318
+ + I+
Sbjct: 200 WLGRRTIR 207
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.065
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G+LS + LR F+ +G V + ++R+ YGFV + AI+ +NG+
Sbjct: 108 GDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 167
Query: 295 LVHGQAIK 318
+ + I+
Sbjct: 168 WLGRRTIR 175
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.15
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 160 TEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGELVHGQAI 315
+E DL+ +FE +G +V+C + R +G++ N EAI +N + GQ +
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYL 278
Query: 316 KI 321
++
Sbjct: 279 RV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 32.3 bits (70), Expect = 0.15
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 160 TEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGELVHGQAI 315
+E DL+ +FE +G +V+C + R +G++ N EAI +N + GQ +
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYL 278
Query: 316 KI 321
++
Sbjct: 279 RV 280
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.26
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN--------YGFVHMENEQVGREAIQNLNGE 294
G+L + LR F K+G V E I+R+ YGFV + AI +NG
Sbjct: 137 GDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGA 196
Query: 295 LVHGQAIK 318
+ + I+
Sbjct: 197 WLGRRTIR 204
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.35
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Frame = +1
Query: 160 TEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGELVHGQAI 315
+E DL+ +FE +G +V+C + R +G++ N EAI +N + GQ +
Sbjct: 219 SETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLGGQYL 278
Query: 316 K 318
+
Sbjct: 279 R 279
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +1
Query: 202 VVECDIVRNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAK 333
VV+C + YGFV + ++ I ++G+ ++G+ I + A+
Sbjct: 123 VVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWAR 166
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 29.9 bits (64), Expect = 0.80
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIV--------RNYGFVHMENEQVGREAIQNLNGE 294
G ++ TE L F +G VV I R +GFV + + AI N+N
Sbjct: 16 GGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMNES 75
Query: 295 LVHGQAIKIEAAK 333
+ G+ I++ A+
Sbjct: 76 ELFGKTIRVNFAR 88
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.9 bits (64), Expect = 0.80
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1
Query: 37 LVFIFLTCVIYCYSLYIVTHNLKCR 111
L+F F++C ++ Y++Y+V H + +
Sbjct: 104 LIFFFISCTMFLYAVYLVKHETELK 128
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDI-------VRNYGFVHMENEQVGREAIQNLNGELV 300
NL TE LR FEKYG + + + R + FV +E A+ N
Sbjct: 9 NLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAKSNQTFF 68
Query: 301 HGQAIKIEAAK 333
+ + + +E +
Sbjct: 69 NSKKLTVEECR 79
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIV 222
NL T E DL+ LF+KYG V E +V
Sbjct: 285 NLPYATKEDDLQFLFKKYGEVSEVQVV 311
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 29.5 bits (63), Expect = 1.1
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Frame = +1
Query: 115 PVLSKSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQV 261
P K G + E DLR LFE++G + E I+++ + H ++
Sbjct: 26 PDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVR 85
Query: 262 GREAIQNLNGELVHGQAIKIEAAKSRXXPSTP-----TTKIFVGNLTDKTRAPEVRELF 423
+ + + +A++++ A + P++P K+F+G L+ + EVR LF
Sbjct: 86 CQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALF 144
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 229 YGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSRXXP 348
+GFV EN Q AI +NG + + +K++ R P
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 417
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 29.5 bits (63), Expect = 1.1
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Frame = +1
Query: 115 PVLSKSSFGNLSDKTTEADLRPLFEKYGTVVECDIVRN-----------YGFVHMENEQV 261
P K G + E DLR LFE++G + E I+++ + H ++
Sbjct: 26 PDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVR 85
Query: 262 GREAIQNLNGELVHGQAIKIEAAKSRXXPSTP-----TTKIFVGNLTDKTRAPEVRELF 423
+ + + +A++++ A + P++P K+F+G L+ + EVR LF
Sbjct: 86 CQATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALF 144
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 270
G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 71 GGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDIVRN-------YGFVHMENEQVGRE 270
G TTE +LR FEK+ V + +V++ YGF+ E E E
Sbjct: 72 GGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 223 RNYGFVHMENEQVGREAIQNLNGELVHGQAIKIEAAKSR 339
+ + +V ENEQ AI LNG + +K+ A+ R
Sbjct: 53 KGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVEC 213
GNL ++ E +L+ LF +G + EC
Sbjct: 121 GNLPNEVKETELKELFSPHGDIAEC 145
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 352 TPTTKIFVGNLTDKTRAPEVRELF 423
T ++FVGNL ++ + E++ELF
Sbjct: 113 TGRCRLFVGNLPNEVKETELKELF 136
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 142 NLSDKTTEADLRPLFEKYGTVVECDIVR 225
N+S K T++ L+ F +YG + C + R
Sbjct: 118 NISAKVTQSQLQSFFSQYGKITSCILPR 145
>L11247-2|AAK84521.1| 1274|Caenorhabditis elegans Npc1 (human
niemann pick c disease)related protein 2 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 6 VYCVGNSWSLFGVHIFNLCYILLFFV 83
V+C +SLFGVH + ++LFFV
Sbjct: 638 VWCSIGMFSLFGVHATDNAIVVLFFV 663
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDI 219
GN+ E ++R +FE++G V E DI
Sbjct: 174 GNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDI 219
GN+ E ++R +FE++G V E DI
Sbjct: 174 GNMPSDVKEREIRHVFEEHGKVEEVDI 200
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 139 GNLSDKTTEADLRPLFEKYGTVVECDI 219
GN+ E ++R +FE++G V E DI
Sbjct: 151 GNMPSDVKEREIRHVFEEHGKVEEVDI 177
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/44 (22%), Positives = 23/44 (52%)
Frame = +1
Query: 85 IVTHNLKCRAPVLSKSSFGNLSDKTTEADLRPLFEKYGTVVECD 216
+V L+ A + + FG + K ++ P+ ++Y + V+C+
Sbjct: 1892 VVMKTLQSLASIFGRKGFGGIFVKHLGKEIMPVVKRYLSKVDCE 1935
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
>U58756-5|AAY44006.1| 288|Caenorhabditis elegans Hypothetical
protein F58F9.8 protein.
Length = 288
Score = 26.2 bits (55), Expect = 9.8
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = -1
Query: 263 PTCSFSMCTKP*FLTISHSTTVPYFSNSG----LRSASVVLSERFPN 135
PTCS+ +C K T STT P +N G + LS FPN
Sbjct: 20 PTCSYDVCAKGGMWT-EWSTTEPCPTNCGSCAKILYTRKCLSTNFPN 65
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 548
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 514 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 548
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 512 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 546
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 181 LFEKYGTVVECDIVRNYGFVHMENEQVGREAIQNL 285
L + +V + + V +Y +HMEN++ GR+ + L
Sbjct: 511 LTRELDSVKDQNAVTDYDVLHMENKKAGRDKYKTL 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,420,816
Number of Sequences: 27780
Number of extensions: 184251
Number of successful extensions: 634
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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