Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32238
         (593 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0797 + 7300370-7300506,7300682-7300798,7301903-7302443,730...    29   2.1  
09_03_0058 + 11950668-11950701,11951068-11951106,11951586-119519...    29   2.8  
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000...    29   3.7  
08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167           28   4.9  
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    28   6.5  
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767...    28   6.5  
04_04_0326 - 24407201-24407374,24407397-24407460,24408266-244086...    27   8.5  

>12_01_0797 +
           7300370-7300506,7300682-7300798,7301903-7302443,
           7302885-7304042,7304133-7304291,7304397-7304504,
           7305045-7305304,7305936-7306101,7307025-7307050,
           7307318-7307402,7307486-7307695,7308815-7308872,
           7308964-7309037,7309323-7309373,7309576-7309664,
           7310027-7310104,7310164-7310269
          Length = 1140

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 446 SL*SSVALPIPFPSRGLWWIGTRWASAWLNLIHHRSRLTRT 568
           SL SS+   +P  + GL  +GTR +S+W    H  ++  R+
Sbjct: 798 SLPSSIRRALPVAAHGLLELGTRTSSSWHRSNHSENKYLRS 838


>09_03_0058 +
           11950668-11950701,11951068-11951106,11951586-11951982,
           11952016-11952314,11953743-11956795
          Length = 1273

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = +1

Query: 85  ISLTGHAPIV-IASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNG 261
           I L+G   I+ ++  ++PP  +  ++ ++ALL  G   ++ G++    +R   H T    
Sbjct: 170 IELSGPLEILSLSGAFMPPPSLANATGLKALLAGGQGQVIGGNV-VGALRARGHVTI--- 225

Query: 262 RRLDALVDDLAFDIVAP 312
             L A+V ++ ++ ++P
Sbjct: 226 --LAAVVSNVTYECLSP 240


>03_06_0614 -
           35099225-35099461,35099545-35099694,35099919-35100066,
           35100152-35100231,35100428-35100594,35100692-35100940,
           35101025-35102310,35102423-35102544,35102946-35103272
          Length = 921

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -3

Query: 528 QADAQRVPIHHSPRDGNG-IGSATELHNDGT 439
           Q   + +P+H  PRDG G  G   E H+ GT
Sbjct: 212 QCKEEPLPLHEPPRDGGGSAGEEEEEHDVGT 242


>08_01_0867 + 8458570-8459168,8460128-8460313,8462684-8463167
          Length = 422

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 232 WNSHTTTPNGRRLDALVDD 288
           W SH T   GRRLDA++ D
Sbjct: 395 WTSHMTPEMGRRLDAILRD 413


>10_08_0894 - 21365629-21365766,21365849-21365950,21366042-21366284,
            21366685-21366813,21366999-21367103,21367196-21367387,
            21367486-21367639,21368148-21368209,21368291-21368437,
            21368517-21368564,21369091-21369228,21369305-21369451,
            21370579-21370665,21370754-21370861,21370941-21371041,
            21371870-21371996,21372820-21372936,21373029-21373106,
            21373240-21373284,21373637-21373756,21373838-21373964,
            21374033-21374253,21374347-21374529,21374772-21374924,
            21375051-21375146,21375226-21375331,21375410-21375492,
            21375576-21375728,21375819-21376058,21376367-21376414,
            21376782-21376928,21377007-21377115,21377200-21377345,
            21377715-21377809,21377944-21378049,21378177-21378368,
            21378456-21378686,21378772-21378866,21379426-21379529,
            21380040-21380284,21380300-21380347,21380376-21380480,
            21380630-21380767,21381458-21381649,21381738-21381914,
            21382001-21382129,21382203-21382316,21382407-21382746,
            21382836-21383064,21383155-21383455,21384311-21384358,
            21387963-21388355
          Length = 2493

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 515  WASAWLNLIHHRSRLTRTLIPSPQ 586
            W+ AWL L+ HRS + + L+ + Q
Sbjct: 2139 WSFAWLELVSHRSFMPKLLLCNAQ 2162


>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
            13676868-13677330,13677855-13678036,13678093-13678235,
            13678315-13678423,13679000-13679456,13680490-13682473,
            13682507-13682626,13682920-13682971
          Length = 1467

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 469  PDSVPVTRTVVDWHTLGISLAESDPPSLPFNPDSYP 576
            P+ +       D HTLG  L +  PPS P  P S P
Sbjct: 1099 PEQIDTKCRTSDRHTLGPPLPDDRPPSPPPLPSSPP 1134


>04_04_0326 -
           24407201-24407374,24407397-24407460,24408266-24408689,
           24408885-24409057,24409178-24409275,24409723-24409853,
           24410053-24410174,24411091-24411245,24411976-24412081,
           24412328-24412419,24412499-24412620,24413444-24413544,
           24413636-24413849,24414173-24414311,24415228-24415584
          Length = 823

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 573 IRVRVKRERWWIRFSQA 523
           IRVR KR  WW RF  A
Sbjct: 118 IRVRYKRWLWWTRFGMA 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,533,297
Number of Sequences: 37544
Number of extensions: 348026
Number of successful extensions: 943
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)