Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32236
         (458 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...   172   9e-44
AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical ...    30   0.93 
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical...    27   6.6  
AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical ...    27   6.6  
AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein p...    27   6.6  
AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm rec...    27   8.7  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score =  172 bits (419), Expect = 9e-44
 Identities = 80/114 (70%), Positives = 92/114 (80%)
 Frame = +1

Query: 115 IDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYKISAPRDASADRFILSKGHAAPILY 294
           I SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P+ ASADRF+LSKGHA PILY
Sbjct: 20  ISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLSKGHACPILY 79

Query: 295 AAWAEAGLFPLDELKNLRKLDSDLEGHPTPRLNFVDVGTGSLGQGLAVAAGMAY 456
           AAW EAGL   +++ +LRK+DSD+EGHPTPRLNF+DV TGSLGQGL VA GMAY
Sbjct: 80  AAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFIDVATGSLGQGLGVATGMAY 133


>AF036692-6|AAB88328.1|  397|Caenorhabditis elegans Hypothetical
           protein C44B12.5 protein.
          Length = 397

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +2

Query: 326 WTS*RTCASWTRTWRATPPRDSTSWTSAPA---HWARGSPWRPAW 451
           W S  T  S   +W A P   STSW +APA    W       P W
Sbjct: 334 WQSENTAPS--TSWGAAPAAPSTSWGAAPAAPPTWGGAPTAAPTW 376


>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
           protein F26C11.3 protein.
          Length = 1317

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 431 SPWPSEPVPTSTKLSRGVGWP 369
           SP  S+P PTST ++    WP
Sbjct: 844 SPTSSKPTPTSTSMTTTYNWP 864


>AL117204-20|CAB55136.2|  699|Caenorhabditis elegans Hypothetical
           protein Y116A8C.32 protein.
          Length = 699

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 452 AMPAATASPWPSEPVPTSTKLSRG 381
           A P+ATA+P P+  VPT + +S G
Sbjct: 27  AAPSATAAPPPALVVPTISSMSSG 50


>AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical
           protein Y53C10A.4 protein.
          Length = 908

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 56  KGDKNVDFEQLKGYRQQTKESTVLLLQTPQSLVIRHHARQ 175
           +G+  +DFE LK +R   ++S++  +    S    HH+R+
Sbjct: 603 EGNIKLDFEALKFHRPSVRKSSLEEVARKNSAEFFHHSRE 642


>AJ243905-1|CAB64866.1|  699|Caenorhabditis elegans SF1 protein
           protein.
          Length = 699

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 452 AMPAATASPWPSEPVPTSTKLSRG 381
           A P+ATA+P P+  VPT + +S G
Sbjct: 27  AAPSATAAPPPALVVPTISSMSSG 50


>AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm
           receptor protein 206 protein.
          Length = 364

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 126 CCYKRLKVWSSDIMRVNGGDNVCSLLPHNAV 218
           CC K  K +SS +  V   D   S +P N V
Sbjct: 326 CCIKLKKKYSSKVANVEVSDRRSSSIPENGV 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,672,647
Number of Sequences: 27780
Number of extensions: 180349
Number of successful extensions: 593
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)