Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32230
         (544 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000195-2|AAC24267.1|  316|Caenorhabditis elegans Hypothetical ...    31   0.41 
Z99281-15|CAB16528.1|  199|Caenorhabditis elegans Hypothetical p...    29   2.2  
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine re...    28   3.8  
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin...    27   8.7  
AF036701-2|AAB88369.2|  625|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AF000195-2|AAC24267.1|  316|Caenorhabditis elegans Hypothetical
           protein C32F10.4 protein.
          Length = 316

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 238 FCNSSDYTRNNRTHLIAHILGLSIILFWIFFLYFSKEFGCLH 113
           F  S+   R    ++ A++L LS+  FW+FFL       C++
Sbjct: 82  FVLSTGAKRRKIAYITAYMLYLSMYTFWVFFLILGAVIACIY 123


>Z99281-15|CAB16528.1|  199|Caenorhabditis elegans Hypothetical
           protein Y57G11C.25 protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 87  TKWLSTGHSCKQPNSFEKXRKKIQNRIIDNPK 182
           TK  S G  CK  +S E+ + K QN  I+NPK
Sbjct: 80  TKACSYGEQCKFAHSVEELQLKHQNLGINNPK 111


>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 280 GRRAYGPPDGECLPSPMDFSNAR 348
           G   Y P   +C P PMD+SN R
Sbjct: 810 GFNPYNPSHSQCPPPPMDYSNNR 832


>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 280 GRRAYGPPDGECLPSPMDFSNAR 348
           G   Y P   +C P PMD+SN R
Sbjct: 810 GFNPYNPSHSQCPPPPMDYSNNR 832


>AF016419-8|AAG24053.1|  293|Caenorhabditis elegans Serpentine
           receptor, class x protein6 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 146 SXFFKRIWLLT*VSS*QPFCVXVCQPIFFSRIPF 45
           S F+  +W+L  +    P+ V   QPI+FS +PF
Sbjct: 214 SIFYVAVWILFQIL---PYIVPADQPIWFSSVPF 244


>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
           protein protein16, isoform d protein.
          Length = 1030

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 317 KHSPSGGPYARLPTRAIKKIKKK 249
           +H+PSGG Y   P  AIK +KK+
Sbjct: 695 RHAPSGGFYPHAP-NAIKVVKKR 716


>AF036701-2|AAB88369.2|  625|Caenorhabditis elegans Hypothetical
           protein ZC416.6 protein.
          Length = 625

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 310 ECLPSPMDFSNARGRAK 360
           EC+P  +DF N++GR K
Sbjct: 556 ECIPKALDFVNSQGRLK 572


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,862,015
Number of Sequences: 27780
Number of extensions: 268465
Number of successful extensions: 661
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)