Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32229
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358572-1|AAQ88935.1|  489|Homo sapiens EAPD458 protein.              33   1.0  
U43318-1|AAC50385.1|  585|Homo sapiens transmembrane receptor pr...    29   9.8  

>AY358572-1|AAQ88935.1|  489|Homo sapiens EAPD458 protein.
          Length = 489

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = +1

Query: 91  PNLHI*YLRPFTFWLAF*HYFMLLKKAEDGLIFGSVPYFMGFTQITSGISYCQSTII--- 261
           PNL + +L PF ++      F   +K   G ++ +V   M  T +  G+ +  S I+   
Sbjct: 120 PNLSLIFLMPFAYFFTESEGFAGSRKGVLGRVYETVVMLMLLTLLVLGMVWVASAIVDKN 179

Query: 262 SGIRRPLSYSWEPGCPYI*FCCIPHL 339
              R  L   WE   PY+ + CI  L
Sbjct: 180 KANRESLYDFWEYYLPYL-YSCISFL 204


>U43318-1|AAC50385.1|  585|Homo sapiens transmembrane receptor
           protein.
          Length = 585

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
 Frame = +3

Query: 186 FWLG--TVLHGIYADNFWHFVLPEYDNFWHSQTPIIFLGA-RLPLHIILLYPAFIYHAAY 356
           FW+G  +VL  I         L + D F + + PIIFL A  L + +  L    + HA+ 
Sbjct: 237 FWIGLWSVLCFISTSTTVATFLIDMDTFRYPERPIIFLSACYLCVSLGFLVRLVVGHASV 296

Query: 357 AVSKLNLPRYAEPFAVGLVTVLIDIPYDIVAVKFVHW 467
           A S+ +   + E     L T++  + Y       + W
Sbjct: 297 ACSREHNHIHYETTGPALCTIVFLLVYFFGMASSIWW 333


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,454,591
Number of Sequences: 237096
Number of extensions: 2153150
Number of successful extensions: 7682
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7682
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)