Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32227
         (697 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein.        62   2e-09
AL121575-8|CAB92073.1|  886|Homo sapiens cofactor required for S...    62   2e-09
AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for S...    62   2e-09
AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for S...    62   2e-09
AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for S...    62   2e-09
AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for S...    62   2e-09
AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein.             62   2e-09
AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor int...    62   2e-09
AF104255-1|AAD12724.1|  936|Homo sapiens transcriptional co-acti...    62   2e-09
AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein.     62   2e-09

>BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein.
          Length = 1359

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 769 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 828


>AL121575-8|CAB92073.1|  886|Homo sapiens cofactor required for Sp1
           transcriptional activation, subunit 3, 130kDa protein.
          Length = 886

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 775 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 834


>AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for Sp1
           transcriptional activation, subunit 3, 130kDa protein.
          Length = 1368

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 769 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 828


>AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for Sp1
           transcriptional activation, subunit 3, 130kDa protein.
          Length = 1374

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 775 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 834


>AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for Sp1
           transcriptional activation, subunit 3, 130kDa protein.
          Length = 1364

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 769 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 828


>AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for Sp1
           transcriptional activation, subunit 3, 130kDa protein.
          Length = 1365

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 775 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 834


>AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein.
          Length = 1364

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 769 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 828


>AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor
           interacting protein protein.
          Length = 1368

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
           SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 769 SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 828


>AF104255-1|AAD12724.1|  936|Homo sapiens transcriptional co-activator
            CRSP130 protein.
          Length = 936

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21   SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
            SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 825  SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 884


>AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein.
          Length = 1421

 Score = 62.1 bits (144), Expect = 2e-09
 Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21   SMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRVNPIAFKYE*KIIFEITVIYIQSNLD 197
            SM+N+NDII+HFS+ G+P LFLCLLWKM+ ET+ +N I ++   +I     V ++++  D
Sbjct: 822  SMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAHVRTFAD 881


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,546,469
Number of Sequences: 237096
Number of extensions: 2103199
Number of successful extensions: 3031
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3021
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)