Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32216
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0240 + 15958110-15958305,15959586-15960763 34 0.060
08_02_0996 - 23404595-23405596 32 0.32
05_01_0327 - 2565574-2565654,2566037-2566099,2566511-2566591,256... 31 0.73
09_04_0412 + 17369935-17370873 30 1.3
09_04_0411 + 17366559-17367497 30 1.3
08_02_0997 + 23409932-23410894 30 1.3
11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679 29 1.7
09_04_0421 + 17417851-17418840 29 1.7
07_01_0447 - 3377666-3378673 29 1.7
01_01_0379 - 2956396-2957409 29 1.7
07_03_1465 - 26729872-26730909 29 2.2
01_01_0378 - 2953514-2954341,2954388-2954504 29 2.2
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 29 3.0
09_04_0417 + 17404433-17405392 28 3.9
07_03_1467 - 26736859-26736868,26737769-26738439 28 3.9
07_03_0776 + 21417476-21417691,21417775-21417855,21417941-214183... 28 3.9
01_01_0370 + 2895685-2895717,2895892-2896944 28 3.9
05_03_0510 + 14864430-14864792,14865234-14865485,14865573-148656... 28 5.2
04_04_1166 - 31427523-31428154,31428888-31429020 28 5.2
03_06_0249 + 32638112-32639140 28 5.2
12_02_0105 + 13647356-13648534 27 6.8
07_01_0448 - 3383706-3384761 27 6.8
07_01_0446 - 3371829-3372132,3374691-3375673 27 6.8
07_01_0233 - 1703602-1705623 27 6.8
02_05_1249 - 35240823-35242184 27 6.8
02_04_0288 + 21607289-21608251 27 6.8
01_05_0810 - 25435193-25435323,25435434-25436360,25436459-254369... 27 6.8
12_01_0203 + 1520079-1520302,1522346-1522405,1522794-1523016,152... 27 9.0
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 27 9.0
06_01_1118 - 9213785-9215051,9215811-9215992,9216075-9216611,921... 27 9.0
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 27 9.0
>09_04_0240 + 15958110-15958305,15959586-15960763
Length = 457
Score = 34.3 bits (75), Expect = 0.060
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Frame = +3
Query: 291 PPLGSLRFKAPQSPE-PWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTP---- 455
P S RF AP+ W RD T GN A D V + DE + + V+ P
Sbjct: 52 PKAHSDRFGAPERVGGSWCATRDKTRSGNGVATKDVV-----IDDETGVSVRVFLPVDAA 106
Query: 456 ---STDGAFLPVMIWIHGGGFKWG 518
+ G LP+++++HGG F G
Sbjct: 107 AAAAAAGRRLPLVVYVHGGAFCTG 130
>08_02_0996 - 23404595-23405596
Length = 333
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 396 VFAKSYVGDENC-LFLNVYTPSTDGAFLPVMIWIHGGGF 509
V +K V D + L + +Y P G LPV+I+ HGG F
Sbjct: 71 VVSKDVVVDRSTGLAVRLYRPKHRGGRLPVLIYFHGGAF 109
>05_01_0327 -
2565574-2565654,2566037-2566099,2566511-2566591,
2566710-2566787,2566892-2566984,2567108-2567225,
2567568-2567695,2567808-2568083,2568763-2568917,
2568997-2569140,2569427-2569844
Length = 544
Score = 30.7 bits (66), Expect = 0.73
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 223 RDGS*TARPGRPSTVSKEYHMRNPHWVLCDLRPHNLQNPGTASGMPRRKGTCVLKSIQSS 402
RDG A PG S S E +N NL + G P +K + ++
Sbjct: 26 RDGGVAASPGSQSAASTERRKKNRG------SKRNLSDGSGEDGRPGKKINLEEEELEEE 79
Query: 403 RNPMSAMKTACS*TCTPL 456
R P+ +ACS +PL
Sbjct: 80 RMPLEDEASACSSCSSPL 97
>09_04_0412 + 17369935-17370873
Length = 312
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +3
Query: 396 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGF 509
V +K V D LF+ V+ P G LPV+++ HGGGF
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQELGKKLPVLVYFHGGGF 84
>09_04_0411 + 17366559-17367497
Length = 312
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +3
Query: 396 VFAKSYVGDENC-LFLNVYTPSTD----GAFLPVMIWIHGGGF 509
V +K V D LF+ V+ P G LPV+++ HGGGF
Sbjct: 42 VVSKDVVLDAGTGLFVRVFLPKVQDQETGKKLPVLVYFHGGGF 84
>08_02_0997 + 23409932-23410894
Length = 320
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 432 LFLNVYTPSTDGA---FLPVMIWIHGGGFKWG 518
L+ +Y P DG LPV++++HGGG G
Sbjct: 56 LWARLYLPDLDGGERKLLPVVVYLHGGGLVVG 87
>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
Length = 939
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 273 GIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEGN-VCAQIDPVFAKSY 413
G+P A + SL PQ+ E W+ RD+ E + + ++ + + SY
Sbjct: 382 GLPLAIITMASLLVNKPQTKEQWEKYRDSIVENDPIVNRMQKILSLSY 429
>09_04_0421 + 17417851-17418840
Length = 329
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
Frame = +3
Query: 444 VYTPSTD----GAFLPVMIWIHGGGFKWG 518
+Y PST G LPV+++ HGGGF G
Sbjct: 65 IYLPSTPASGYGRRLPVLVFFHGGGFCLG 93
>07_01_0447 - 3377666-3378673
Length = 335
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +3
Query: 393 PVFAKSYVGDENC-LFLNVYTPSTDGAF---LPVMIWIHGGGF 509
PV K V D L L +Y P+ G LPV+++ HGGGF
Sbjct: 49 PVQWKDVVYDAGRGLRLRMYAPANHGGEEGKLPVLVYFHGGGF 91
>01_01_0379 - 2956396-2957409
Length = 337
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 432 LFLNVYTPST--DGAFLPVMIWIHGGGFKWG 518
L L VY P T D LPV++ HGGG+ G
Sbjct: 64 LKLRVYRPPTAGDAERLPVLVCFHGGGYCLG 94
>07_03_1465 - 26729872-26730909
Length = 345
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 432 LFLNVYTPSTDGAF--LPVMIWIHGGGF 509
L+ V+ P T+ A LPV+++ HGGGF
Sbjct: 74 LWARVFCPPTNTAAVKLPVVVYFHGGGF 101
>01_01_0378 - 2953514-2954341,2954388-2954504
Length = 314
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 12/76 (15%)
Frame = +3
Query: 318 APQSPEPWDGIRDATAEGNVCAQIDPVFAKSY---VGDE-NCLFLNVYTPST-------- 461
AP E + G+ ++G+V + V S+ V D + L + VYT T
Sbjct: 9 APHVVEDFYGVVKLLSDGSVVRGDESVLIPSWKDVVYDATHGLRVRVYTSRTAAAAAAGD 68
Query: 462 DGAFLPVMIWIHGGGF 509
DG LPV+++ HGGG+
Sbjct: 69 DGGKLPVLVYFHGGGY 84
>11_06_0388 + 23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -2
Query: 428 VFIADIGFREDW-IDLSTHVPFRRGIPDAVPGFWRLWGLKSQRTQ 297
V + + F+E+ + + R P+A PG WR+W +RT+
Sbjct: 1052 VILGMVSFQEEQSFEPQGMIKVERVEPNAAPGGWRIWPFSFKRTR 1096
>09_04_0417 + 17404433-17405392
Length = 319
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = +3
Query: 312 FKAPQSPEPWDGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNVYTPSTDGAFLPVMIW 491
F +P +DG T++ V V A+ Y+ D L P LP++++
Sbjct: 27 FGTETTPAGFDGATGVTSKDVVIDDATGVSARLYIPD-----LPASGPGHHRKKLPIVVY 81
Query: 492 IHGGG 506
HGGG
Sbjct: 82 FHGGG 86
>07_03_1467 - 26736859-26736868,26737769-26738439
Length = 226
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = +3
Query: 432 LFLNVYTPSTDGAF----LPVMIWIHGGGF 509
L+ V++P++ A LPV+++ HGGGF
Sbjct: 83 LWARVFSPASSSAVESPPLPVVVYFHGGGF 112
>07_03_0776 +
21417476-21417691,21417775-21417855,21417941-21418342,
21418457-21418621,21418729-21419460,21419542-21419748
Length = 600
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 318 APQSPEPWDGIRDATAEGNVCAQIDPVFAK 407
AP+ P P+DG D + G + ID VF K
Sbjct: 565 APEPPYPFDGETDMSVGGGLAELIDWVFDK 594
>01_01_0370 + 2895685-2895717,2895892-2896944
Length = 361
Score = 28.3 bits (60), Expect = 3.9
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 462 DGAFLPVMIWIHGGGF 509
DG LPV+++ HGGG+
Sbjct: 98 DGGKLPVLVYFHGGGY 113
>05_03_0510 +
14864430-14864792,14865234-14865485,14865573-14865671,
14865789-14866082,14866630-14867010
Length = 462
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Frame = +3
Query: 60 IKHLCNELNK---ILINNSGVNNEF---PTMISAVNEFLXD---LRGGRMSESPLVTVEQ 212
+K LC EL I++ G+N P + V F+ L+G RM +SP+ ++
Sbjct: 114 LKELCEELRVSGGIILAPEGINGSICGTPEAVEKVLNFIQSDDRLKGLRMIQSPVTPEDE 173
Query: 213 GQLQGRIVNSPSG 251
G SP G
Sbjct: 174 AIHHGHTSQSPVG 186
>04_04_1166 - 31427523-31428154,31428888-31429020
Length = 254
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 409 DFAKTGSI*AHTFPSAVASLMPSQGSGDCGALNRKEPNGG 290
DFA G HT P A L QG+ G + +P GG
Sbjct: 105 DFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGG 144
>03_06_0249 + 32638112-32639140
Length = 342
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 432 LFLNVYTP---STDGAFLPVMIWIHGGGF 509
L L VY P + G LPV+++ HGGG+
Sbjct: 60 LKLRVYRPPAATVAGEKLPVLVYFHGGGY 88
>12_02_0105 + 13647356-13648534
Length = 392
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 249 GKAFYSFQGIPYAKPPLGSLRFKAPQ---SPEPWDGIRDATAEGNVCAQI 389
G AF + IP P+GSL +KAP+ +D D A G + AQ+
Sbjct: 210 GMAFAMEESIPPYSNPVGSLPYKAPELLLRSSIYDETIDMWALGCIMAQL 259
>07_01_0448 - 3383706-3384761
Length = 351
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 465 GAFLPVMIWIHGGGFKWG 518
G LPV+++ HGGGF G
Sbjct: 88 GGKLPVLVYFHGGGFCLG 105
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 432 LFLNVYTPSTDGAF---LPVMIWIHGGGF 509
L + +Y P+ G LPV+++ HGGGF
Sbjct: 64 LGVRMYRPAATGGAEEKLPVVVYFHGGGF 92
>07_01_0233 - 1703602-1705623
Length = 673
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 342 DGIRDATAEGNVCAQIDPVFAKSYVGDENCLFLNV 446
D + D EG++ +DP Y DE CL L +
Sbjct: 574 DWVMDCWNEGSLLETMDPKLQNEYDADEACLALKL 608
>02_05_1249 - 35240823-35242184
Length = 453
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = -3
Query: 346 PSQGSGDCGALNRKE-PNGGFAYGIPWKL*KAFPDGLFT--IRPWSCPCSTVTRGDSDIL 176
P +GS + A+ P G A G+ A D F ++ W+ C + GD D +
Sbjct: 137 PEEGSSELAAVQVTVFPGKGLAVGVSIHH-VACDDSSFMHFVKTWAANCRVASGGDVDAV 195
Query: 175 PP 170
PP
Sbjct: 196 PP 197
>02_04_0288 + 21607289-21608251
Length = 320
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 453 PSTDGAFLPVMIWIHGGGF 509
P+ LPV++++HGGGF
Sbjct: 67 PAAAAERLPVVVYVHGGGF 85
>01_05_0810 -
25435193-25435323,25435434-25436360,25436459-25436987,
25437089-25437190
Length = 562
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 341 PGFWRLWGLKSQRTQWGFRIWYSLETVEGLPGRAVYDPSLELP 213
PG W L T WG ++ + +E G P +V P +LP
Sbjct: 519 PGVWFLHCHLEVHTSWGLKMAFLVEDGSG-PDESVLPPPKDLP 560
>12_01_0203 +
1520079-1520302,1522346-1522405,1522794-1523016,
1523038-1523434,1523522-1523781,1523866-1524011,
1524044-1524317,1524501-1525547
Length = 876
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 187 SDILPPRRSXRNSFTADIIVGNSLFTPELLIKILFNSLHRCFIHSLHS 44
+D++ P R F D +V S F P + SLH+CF H S
Sbjct: 407 ADVMRPDDVGRQLF--DELVERSFFQPTFVSNNNSVSLHQCFFHGERS 452
>07_03_1555 -
27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 364 AVASLMPSQGSGDCGALNRKEPNGGFAYGIPWKL 263
A+ +L + G CGA N G GIPW L
Sbjct: 117 ALVALGCMEHRGGCGADNDSGDGSGLMSGIPWDL 150
>06_01_1118 -
9213785-9215051,9215811-9215992,9216075-9216611,
9216742-9217224
Length = 822
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 282 YAKPPLGSLRFK-APQSPE--PWDGIRDATA-EGNVCAQIDPVFAKSYVGDENCLFLNVY 449
Y KP LG ++++ P S + D R ++ G A I A++++ CL V
Sbjct: 104 YGKPDLGFVQWRWRPDSCDLPRLDPARFLSSMRGKTLAFIGDSLARNHMNSLICLLTRVA 163
Query: 450 TPSTDGAFLPVMIWIHGGGFKW 515
P+T ++ +GGG+ +
Sbjct: 164 EPTTSWPSSEHTVYHYGGGYNF 185
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 246 SGKAFYSFQGIPYAKPPLGSLRFKAPQSPEPWDGIRDATAEG 371
S K +G+P A +GSL PQ+ WD + + G
Sbjct: 357 SEKTLRKCEGVPLAIITIGSLLAMRPQNLYQWDRVHNLIGSG 398
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,665,098
Number of Sequences: 37544
Number of extensions: 409299
Number of successful extensions: 1159
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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