Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32211
         (529 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1175 + 26702744-26704507                                         29   2.3  
01_05_0475 - 22571571-22572466,22572626-22572947                       29   3.1  
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846...    28   5.3  
03_05_1032 - 29861859-29862011,29862347-29862470,29862557-298627...    28   5.3  
10_03_0017 - 7114180-7114196,7115266-7115686                           27   9.3  
01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404     27   9.3  
01_01_0138 + 1253256-1253534,1253625-1254359                           27   9.3  

>12_02_1175 + 26702744-26704507
          Length = 587

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 408 GFSGSFCILXTQLAIFLDTILTGGLKSWRAKASLSL 515
           GF    C L   L   L  +LTG +  W A + LSL
Sbjct: 231 GFVRDVCFLLVALCYLLAVLLTGAVTVWSAASFLSL 266


>01_05_0475 - 22571571-22572466,22572626-22572947
          Length = 405

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 332 LLKYFEDHQLISDRQYSFSGLFGSLRFLRIFLYTGHSTCDLLGYH 466
           LL+ F   + +  R  S  G+   LR LRI +Y GH   D    H
Sbjct: 40  LLRAFTIIEEVDGRYISNQGMLLQLRQLRIVMYKGHYVLDTFKGH 84


>08_02_0731 -
           20483518-20484154,20484182-20484375,20484541-20484640,
           20485282-20485622
          Length = 423

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 2   GGSTPPNIPRC--DSSLPGDLLHTVCSQARSPDPGR 103
           GG++P  +PRC   +S  G L  T  + +  PDP R
Sbjct: 19  GGASPSPLPRCIRSNSASGALAATRSASSPWPDPAR 54


>03_05_1032 -
           29861859-29862011,29862347-29862470,29862557-29862759,
           29863081-29863199,29863489-29863623,29863695-29863950,
           29864749-29864880,29865001-29865222
          Length = 447

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 212 DSVFMEDCPRYPQE 253
           DSV+ E+CP+YP E
Sbjct: 239 DSVYKENCPKYPSE 252


>10_03_0017 - 7114180-7114196,7115266-7115686
          Length = 145

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 96  LDVHRSNGPECIPTVVLTTYPELTTALMR 182
           +D H++ GP  +P VV   Y  L T + R
Sbjct: 116 IDEHQTTGPVYLPGVVFPNYKSLVTKIGR 144


>01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404
          Length = 444

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 2   GGSTPPNIPRCDSSLPGDLLHTVCSQARSPDPGRP*V---KWARMHPYSGFD 148
           GG  PP      S+LP ++L T+ S  R  +  R  V   +W  + PY+  D
Sbjct: 5   GGDGPPCDSDYISNLPENVLVTILSLLRLDEAARSTVLSTRWRHLFPYTLLD 56


>01_01_0138 + 1253256-1253534,1253625-1254359
          Length = 337

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -3

Query: 140 HCRDAFWPI*PMDVQDLEISPDCTLCEADLPAKSYHTGG 24
           HC     P+ P   Q       C+ C  D+P K  HT G
Sbjct: 79  HCPLCLLPLKPPTYQCAAGHLACSSCHGDVPGKKCHTCG 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,265,271
Number of Sequences: 37544
Number of extensions: 352638
Number of successful extensions: 812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)