Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32211
         (529 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   3.4  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             22   3.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   4.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   4.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = +2

Query: 290 NSLLCVMERIINTELLKYFEDHQLISDRQYSFSGLFGSLR 409
           NS++C+  +++  E +    + + + D  + F+    SLR
Sbjct: 292 NSMICLNGQVLKRESIHNSSNARFLMDSMFDFAERVNSLR 331


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 309 ITQSREFITTGL*LDGFDPSWG 244
           ITQS+  +  GL L G +PS G
Sbjct: 192 ITQSQYLLQQGLGLQGHNPSSG 213


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 419 IFLYTGHSTCDLLGYHTHRW 478
           + LYT  S C  LGY    W
Sbjct: 174 LVLYTTPSICTALGYLKDAW 193


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 419 IFLYTGHSTCDLLGYHTHRW 478
           + LYT  S C  LGY    W
Sbjct: 169 LVLYTTPSICTALGYLKDAW 188


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 181 RISAVVNSGYVVKTTVGMHS 122
           RISA ++SGY++      H+
Sbjct: 333 RISAAIDSGYILNNDGKWHN 352


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 181 RISAVVNSGYVVKTTVGMHS 122
           RISA ++SGY++      H+
Sbjct: 333 RISAAIDSGYILNNDGKWHN 352


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 157 GYVVKTTVGMHSG 119
           G  VK T+G+HSG
Sbjct: 505 GEPVKITIGIHSG 517


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 157 GYVVKTTVGMHSG 119
           G  VK T+G+HSG
Sbjct: 505 GEPVKITIGIHSG 517


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 15/64 (23%), Positives = 22/64 (34%)
 Frame = +3

Query: 93  ILDVHRSNGPECIPTVVLTTYPELTTALMRFYRLS*STYRIPSSWKTVHAIPKKGRTHQA 272
           +  VH   G  C P V       L   L    +++     +P     VH +   GR   A
Sbjct: 62  LFPVHEKGGASCGPNVYNRGVQRLEAMLFAVDQINRDEDILPGITIGVHILDTCGRDTYA 121

Query: 273 IGLS 284
           +  S
Sbjct: 122 LNQS 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,074
Number of Sequences: 438
Number of extensions: 3487
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)