Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32208
(605 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 120 2e-28
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 85 6e-18
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 33 0.043
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 31 0.17
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 29 0.70
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 28 0.92
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 28 1.2
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 27 1.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 4.9
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 25 6.5
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 6.5
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 25 6.5
SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor c... 25 8.6
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 25 8.6
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 25 8.6
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 120 bits (288), Expect = 2e-28
Identities = 58/108 (53%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Frame = +3
Query: 285 PSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKI 464
P+H +N+PALSPTM +G+I +++KK GDK+ GD+LCEIETDKA + FE +E YLAKI
Sbjct: 51 PAHTVINMPALSPTMTTGNIGAFQKKIGDKIEPGDVLCEIETDKAQIDFEQQDEGYLAKI 110
Query: 465 LIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFK-DDSSPATPQKPASQD 605
LI GTK VPVGK L + V ++ DVAA DF +DSS P + ++
Sbjct: 111 LIETGTKDVPVGKPLAVTVENEGDVAAMADFTIEDSSAKEPSAKSGEE 158
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 85.4 bits (202), Expect = 6e-18
Identities = 41/89 (46%), Positives = 58/89 (65%)
Frame = +3
Query: 306 LPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKILIPAGTK 485
+PALSPTME G+I W KEGD GD+L E+ETDKATM E + LAK+LI G+
Sbjct: 40 MPALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKGS- 98
Query: 486 GVPVGKLLCIIVGDQNDVAAFKDFKDDSS 572
+PVGK + I+ ++++ + KD++S
Sbjct: 99 NIPVGKNIAIVADAEDNLKDLELPKDEAS 127
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 32.7 bits (71), Expect = 0.043
Identities = 13/61 (21%), Positives = 29/61 (47%)
Frame = +3
Query: 297 KVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKILIPA 476
++ P ++ G++ W K+ G+ + + + + +ETDK P+ L + L+
Sbjct: 44 RIKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKE 103
Query: 477 G 479
G
Sbjct: 104 G 104
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 30.7 bits (66), Expect = 0.17
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 210 LEHAQNQTVLSTPQWTVQMXYYSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDK 374
L Q Q +++ P W + YY +P H + L T+ S WE++ G++
Sbjct: 257 LRFTQRQILMNDPYWN-RGFYYDGVPPHTGMKLAREVATISYRSGPEWEQRFGNR 310
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 28.7 bits (61), Expect = 0.70
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 333 SGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKILIPAG 479
SG+IV KEG K+ +GD++ + K + P L + + G
Sbjct: 1122 SGTIVEIRVKEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQG 1170
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 0.92
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 225 NQTVLSTPQWTVQMXYYSSLPSHIKVNLPALSPTMESGSIVSWEKKE 365
N + +TP W V+ S+L + + + PAL P+ V KK+
Sbjct: 646 NSSAANTPSWGVRKARASALNARSEEDFPALPPSTSKRISVQLGKKQ 692
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 108 RNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMXYYSSLP 287
++ L D + IRS ++ LA +V + LE + + V T QW +M + +
Sbjct: 1060 KSPFLGDDEAREIRSKQSQGWGDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTL 1119
Query: 288 SHIKVNLPALS 320
I+ N LS
Sbjct: 1120 QQIRQNRNELS 1130
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 27.5 bits (58), Expect = 1.6
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 195 VTNKLLEHAQNQTVLSTPQWTVQMXYYSSLPSHIKVNLPALSP-TMESGSIVS 350
V+NK L HAQ + S P Q + S PS + +++P T+E+G++ S
Sbjct: 177 VSNKSLPHAQQSIIRSFPDIQKQPKGFFSYPSS---TVSSIAPSTLEAGNLHS 226
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 135 KKAIRSNITRCISTELAKRKVTN 203
K A+R+NI RC+ T + + N
Sbjct: 3460 KSAVRTNIERCVQTSIESKYYKN 3482
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 80 IDNVANNCVTESNLKRWS*ESYTVEH 157
I+NVANN + L WS Y V+H
Sbjct: 157 INNVANNSLKVKPLTLWSTLLYIVQH 182
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 514 LLLEIRMMLRHSKISKMTHHLQHLK 588
L + + +L+HS I K+ H+LQ+ K
Sbjct: 4454 LNVSVSDILQHSSIEKLAHYLQYEK 4478
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 25.4 bits (53), Expect = 6.5
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 185 KKESYE*IVRTCTEPDSSIYTTMDCSDXVLFEST-ITYKGQPSSSFANHGEWFNCKLGKK 361
+K E V T+ S Y D ST I Y GQP+ FA+ W N GK
Sbjct: 362 EKIGCEGFVCVVTDVQSEPYVGDDAETIQSRNSTFINYDGQPAVRFADLAVW-NSYKGKL 420
Query: 362 G 364
G
Sbjct: 421 G 421
>SPAC29A4.10 |rrn5||RNA polymerase I upstream activation factor
complex subunit Rrn5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 556
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 345 VSWEKKEGDKLIEGDLLCEIET 410
+ WE+K ++L+EG + +ET
Sbjct: 153 IDWEEKIAERLLEGSNISGVET 174
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -3
Query: 117 FDSVTQLFAT-LSIFFTKTIPS 55
F+S T + +T L +FFT+T PS
Sbjct: 820 FESTTLVLSTGLDVFFTRTAPS 841
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 418 QLWALRHLKXVTWPKY*FRPVQRECL 495
+LW L + K VTW Y + R CL
Sbjct: 260 ELWCLLNDKRVTWKAYAGHWIARVCL 285
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,588,080
Number of Sequences: 5004
Number of extensions: 54667
Number of successful extensions: 146
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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