Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32208
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p pro...   182   3e-46
AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB...   182   3e-46
AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA...   149   4e-36
BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p pro...    42   9e-04
AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p pro...    42   9e-04
AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA...    42   9e-04
AY061469-1|AAL29017.1|  462|Drosophila melanogaster LD43554p pro...    40   0.003
AE014298-2103|AAF48423.1|  462|Drosophila melanogaster CG5599-PA...    40   0.003
L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein...    29   6.5  
AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p pro...    29   6.5  
AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-P...    29   6.5  
BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p pro...    28   8.6  
AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA...    28   8.6  

>BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p
           protein.
          Length = 512

 Score =  182 bits (443), Expect = 3e-46
 Identities = 94/171 (54%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
 Frame = +3

Query: 90  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMX 269
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 270 Y-YSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEE 446
             Y++LP HI+V LPALSPTME GSIVSWEKKEGDKL EGDLLCEIETDKATMGFETPEE
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEE 131

Query: 447 XYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKPAS 599
            +LAKILI  GTK VPVG+LLCIIV DQ  VAAF +FKDD + A P  PA+
Sbjct: 132 GFLAKILIQGGTKDVPVGQLLCIIVPDQGSVAAFANFKDDGAAAAPAAPAA 182


>AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB,
           isoform B protein.
          Length = 512

 Score =  182 bits (443), Expect = 3e-46
 Identities = 94/171 (54%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
 Frame = +3

Query: 90  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMX 269
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 270 Y-YSSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEE 446
             Y++LP HI+V LPALSPTME GSIVSWEKKEGDKL EGDLLCEIETDKATMGFETPEE
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEE 131

Query: 447 XYLAKILIPAGTKGVPVGKLLCIIVGDQNDVAAFKDFKDDSSPATPQKPAS 599
            +LAKILI  GTK VPVG+LLCIIV DQ  VAAF +FKDD + A P  PA+
Sbjct: 132 GFLAKILIQGGTKDVPVGQLLCIIVPDQGSVAAFANFKDDGAAAAPAAPAA 182


>AE014134-1275|AAF52515.1|  421|Drosophila melanogaster CG5261-PA,
           isoform A protein.
          Length = 421

 Score =  149 bits (360), Expect = 4e-36
 Identities = 71/91 (78%), Positives = 76/91 (83%)
 Frame = +3

Query: 327 MESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKILIPAGTKGVPVGKL 506
           ME GSIVSWEKKEGDKL EGDLLCEIETDKATMGFETPEE +LAKILI  GTK VPVG+L
Sbjct: 1   MERGSIVSWEKKEGDKLNEGDLLCEIETDKATMGFETPEEGFLAKILIQGGTKDVPVGQL 60

Query: 507 LCIIVGDQNDVAAFKDFKDDSSPATPQKPAS 599
           LCIIV DQ  VAAF +FKDD + A P  PA+
Sbjct: 61  LCIIVPDQGSVAAFANFKDDGAAAAPAAPAA 91


>BT003564-1|AAO39568.1|  468|Drosophila melanogaster LP03989p
           protein.
          Length = 468

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
 Frame = +3

Query: 138 KAIRSN-ITRCI---STELAKRKVTNKLL-EHAQNQTVLSTPQWTVQMXYY-SSLPSHIK 299
           +A+RSN + RCI   S  +A      +LL +   N+   +T   T Q  +  SSL S   
Sbjct: 19  RALRSNEVKRCIRQYSRLVACAAQQQQLLRQDGSNRCQEATRLLTWQGIHTTSSLWSEQT 78

Query: 300 VNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKILIPAG 479
           VN+P  + ++  G I  +  K GD     + + EIETDK T+    P    L  IL+  G
Sbjct: 79  VNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTLTDILVKDG 137


>AY089515-1|AAL90253.1|  468|Drosophila melanogaster GM01350p
           protein.
          Length = 468

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
 Frame = +3

Query: 138 KAIRSN-ITRCI---STELAKRKVTNKLL-EHAQNQTVLSTPQWTVQMXYY-SSLPSHIK 299
           +A+RSN + RCI   S  +A      +LL +   N+   +T   T Q  +  SSL S   
Sbjct: 19  RALRSNEVKRCIRQYSRLVACAAQQQQLLRQDGSNRCQEATRLLTWQGIHTTSSLWSEQT 78

Query: 300 VNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKILIPAG 479
           VN+P  + ++  G I  +  K GD     + + EIETDK T+    P    L  IL+  G
Sbjct: 79  VNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTLTDILVKDG 137


>AE014297-1281|AAF54625.1|  468|Drosophila melanogaster CG5214-PA
           protein.
          Length = 468

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
 Frame = +3

Query: 138 KAIRSN-ITRCI---STELAKRKVTNKLL-EHAQNQTVLSTPQWTVQMXYY-SSLPSHIK 299
           +A+RSN + RCI   S  +A      +LL +   N+   +T   T Q  +  SSL S   
Sbjct: 19  RALRSNEVKRCIRQYSRLVACAAQQQQLLRQDGSNRCQEATRLLTWQGIHTTSSLWSEQT 78

Query: 300 VNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYLAKILIPAG 479
           VN+P  + ++  G I  +  K GD     + + EIETDK T+    P    L  IL+  G
Sbjct: 79  VNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTLTDILVKDG 137


>AY061469-1|AAL29017.1|  462|Drosophila melanogaster LD43554p
           protein.
          Length = 462

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = +3

Query: 276 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYL 455
           SSL   +  NL  +   +   ++  W  KEGD + + D LCE+++DKA++   +  +  +
Sbjct: 33  SSLDKTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDGKI 92

Query: 456 AKI 464
            KI
Sbjct: 93  TKI 95


>AE014298-2103|AAF48423.1|  462|Drosophila melanogaster CG5599-PA
           protein.
          Length = 462

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 19/63 (30%), Positives = 34/63 (53%)
 Frame = +3

Query: 276 SSLPSHIKVNLPALSPTMESGSIVSWEKKEGDKLIEGDLLCEIETDKATMGFETPEEXYL 455
           SSL   +  NL  +   +   ++  W  KEGD + + D LCE+++DKA++   +  +  +
Sbjct: 33  SSLDKTVSFNLSDIGEGIREVTVKEWFVKEGDTVEQFDNLCEVQSDKASVTITSRYDGKI 92

Query: 456 AKI 464
            KI
Sbjct: 93  TKI 95


>L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 96  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 251
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 96  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 251
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-PA
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 96  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 251
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>BT010264-1|AAQ23582.1| 1238|Drosophila melanogaster RE27764p
           protein.
          Length = 1238

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 481 QRECLSGNYCALLLEIRMMLRHSKISKMTH-HLQHLKNRLVK 603
           Q   L G +   L  +R+MLRH+ I ++++  L  L+N LV+
Sbjct: 76  QLPALPGRFFGSLQIVRLMLRHNSIERVSNGWLNELENGLVE 117


>AE014296-3371|AAF51605.2| 1535|Drosophila melanogaster CG5195-PA
           protein.
          Length = 1535

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 481 QRECLSGNYCALLLEIRMMLRHSKISKMTH-HLQHLKNRLVK 603
           Q   L G +   L  +R+MLRH+ I ++++  L  L+N LV+
Sbjct: 76  QLPALPGRFFGSLQIVRLMLRHNSIERVSNGWLNELENGLVE 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,489,907
Number of Sequences: 53049
Number of extensions: 578038
Number of successful extensions: 1332
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)