Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32204
         (626 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   1.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   1.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   1.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 123 FGFSLEQVRNAKQSAGLQQIAINLKTGDTT 212
           FG  ++ V N      + +  +NLK+G  T
Sbjct: 525 FGHEVDLVHNYMNFMQMDEFVVNLKSGSNT 554


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 123 FGFSLEQVRNAKQSAGLQQIAINLKTGDTT 212
           FG  ++ V N      + +  +NLK+G  T
Sbjct: 525 FGHEVDLVHNYMNFMQMDEFVVNLKSGSNT 554


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 123 FGFSLEQVRNAKQSAGLQQIAINLKTGDTT 212
           FG  ++ V N      + +  +NLK+G  T
Sbjct: 151 FGHEVDLVHNYMNFMQMDEFVVNLKSGSNT 180


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 573  THNITKLLPYIWTCAN 620
            T  +T  LPY WT  N
Sbjct: 1098 TEKLTDRLPYPWTMDN 1113


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 555 QIAGDITHNITKLLPYIW 608
           +IA  +T +  K+LPY W
Sbjct: 282 RIARQMTTSRKKVLPYYW 299


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 142 CSKLKPKGKPDSTALNPASLAKAYRSK 62
           C+ L  K +PD    +P    K YR++
Sbjct: 184 CNHLMTKFEPDLDMNHPGFADKEYRAR 210


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,305
Number of Sequences: 438
Number of extensions: 3512
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)