Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32188
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical pr... 108 3e-24
U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical p... 49 2e-06
U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical p... 49 2e-06
U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical pr... 44 5e-05
U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical pr... 30 1.2
U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astaci... 29 1.7
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 29 2.2
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 29 2.9
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 28 5.0
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 27 6.7
>U97405-5|AAB53010.3| 444|Caenorhabditis elegans Hypothetical
protein T09B4.8 protein.
Length = 444
Score = 108 bits (259), Expect = 3e-24
Identities = 47/90 (52%), Positives = 66/90 (73%)
Frame = +2
Query: 155 QQVEQMKGVYMPPSITNAYKKPVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKV 334
Q+V+ ++ + +P YK +L+T+G Q+L+D++GK+YLD FGGIVTVSVGHCHPK+
Sbjct: 2 QRVQALRPL-LPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKI 60
Query: 335 NAALKDQLDVLWHTTNLXRHPKIYEYVEQL 424
NAAL +Q LWHTT++ IYEY E+L
Sbjct: 61 NAALTEQAQKLWHTTSIYHTEPIYEYAEKL 90
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 429 AKLPGDLNVVYLVNSGSEANELATLLAKAXTGNLDIISL 545
+K P LN V+ VNSGSEAN+LA LA+ TG D+IS+
Sbjct: 92 SKFPSKLNSVFFVNSGSEANDLALALARNYTGRFDVISM 130
>U41534-14|AAV34796.1| 226|Caenorhabditis elegans Hypothetical
protein C16A3.10c protein.
Length = 226
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 218 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLXRHP 397
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 398 KIYEYVEQLCR 430
+ EY E + +
Sbjct: 100 VLGEYEEYVTK 110
>U41534-13|AAD31050.2| 422|Caenorhabditis elegans Hypothetical
protein C16A3.10a protein.
Length = 422
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 218 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTNLXRHP 397
PV L++G +++D +GK+Y D V+ GHCHPK+ +++Q L T+ +
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKLLKVVQEQASTLTLTSRAFYNN 99
Query: 398 KIYEYVEQLCR 430
+ EY E + +
Sbjct: 100 VLGEYEEYVTK 110
>U80931-3|AAO91701.1| 160|Caenorhabditis elegans Hypothetical
protein T01B11.2b protein.
Length = 160
Score = 44.4 bits (100), Expect = 5e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 218 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 358
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 435 LPGDLNVVYLVNSGSEANELATLLAKAXTGNLDII 539
LPG L+ V NSGSEAN+LA LA+ T + D I
Sbjct: 119 LPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAI 152
>U80931-2|AAB37999.1| 467|Caenorhabditis elegans Hypothetical
protein T01B11.2a protein.
Length = 467
Score = 44.4 bits (100), Expect = 5e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 218 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQL 358
P ++++ MQ+LYD ++LD + VGHCHPKV A+ QL
Sbjct: 50 PFMVSRASMQYLYDEKSNKFLDCISNVQ--HVGHCHPKVVEAISKQL 94
Score = 33.5 bits (73), Expect = 0.10
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +3
Query: 435 LPGDLNVVYLVNSGSEANELATLLAKAXTGNLDII 539
LPG L+ V NSGSEAN+LA LA+ T + D I
Sbjct: 119 LPG-LDTVLFCNSGSEANDLALRLARDYTKHKDAI 152
>U41534-12|AAM22027.1| 357|Caenorhabditis elegans Hypothetical
protein C16A3.10b protein.
Length = 357
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 218 PVLLTQGHMQWLYDNDGKRYLDLFGGIVTVSVGHCHPKVNAALKDQLDVLWHTTN 382
PV L++G +++D +GK+Y D V+ GHCHPK+ LKD V+ N
Sbjct: 40 PVALSKGEGCFVWDVEGKKYFDFLAAYSAVNQGHCHPKL---LKDNEAVVVFAEN 91
>Z73976-1|CAA98289.1| 324|Caenorhabditis elegans Hypothetical
protein T07C12.1 protein.
Length = 324
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -3
Query: 168 CSTCWYEGPVYGLGTKSVGGILAVLYVLTMSKHNFVPLLAISMCLSVEAIAICH 7
C CWY P++ + ++G L L V+ ++ F LAI +CL V I H
Sbjct: 261 CVLCWYS-PIFNI---NLGRGLNYLEVIALAAFPFCDPLAIILCLPVLRNRILH 310
>U13072-7|AAK31398.2| 382|Caenorhabditis elegans Nematode astacin
protease protein 7 protein.
Length = 382
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 329 KVNAALKDQLDVLWHTTNLXRHPKIYEYVEQLC 427
K ++ +D++ V W T + R P IY+ + LC
Sbjct: 343 KPSSQCEDRITVCWWTADRCRSPAIYQVMSSLC 375
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 329 KVNAALKDQLDVLWHTTNLXRHPKIYEYVEQLCR 430
K N K + + H L HP ++E VE+ CR
Sbjct: 632 KTNTGSKSLRNTMIHLRKLCNHPFLFENVEESCR 665
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 104 KMPPTDFVPRPYTGPSYQQVEQMKGVYMPPSITNAYKKP 220
K+ P + P+ G YQQ++Q PP + NAY+ P
Sbjct: 204 KVHPMPYHPQMNKGNHYQQLQQYT---QPPPVYNAYQPP 239
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 178 SFHLFYLLVRRSRVRSGHEIRRRHFGRAVRSDDVEA*FCSSIS 50
SFH L R+R R R R + RSDDV A S+++
Sbjct: 197 SFHTCLLYYLRNRFRHFFPARTRSARNSTRSDDVPAPLLSNVT 239
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 156 WYEGPVYGLGTKSVGGILAV-LYVLTMSKHNFVPLLAIS 43
W+ G + G+G + GG+LA L ++ S ++ V LL +S
Sbjct: 135 WWIGIIIGIGLYTAGGLLAYSLAIVATSFYHTVFLLVLS 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,820,957
Number of Sequences: 27780
Number of extensions: 314456
Number of successful extensions: 870
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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