BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32181
(545 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151894-1|AAZ57340.1| 806|Drosophila melanogaster RE26466p pro... 34 0.11
DQ151893-1|AAZ57339.1| 806|Drosophila melanogaster RE44293p pro... 34 0.11
AE014134-686|AAN10364.2| 781|Drosophila melanogaster CG3980-PA,... 34 0.11
AE014134-685|AAF51055.3| 806|Drosophila melanogaster CG3980-PB,... 34 0.11
AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA... 28 9.5
>DQ151894-1|AAZ57340.1| 806|Drosophila melanogaster RE26466p
protein.
Length = 806
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 483 VAHNNIQDLNEICHLVHLSNL 545
+A N+I DLNEIC L HLSNL
Sbjct: 171 LAKNSINDLNEICTLSHLSNL 191
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 404 LSLERNRIIDLRQCDRYLPSNL 469
L L NR+ LRQCD+ LP++L
Sbjct: 145 LYLHGNRLTHLRQCDKCLPTSL 166
>DQ151893-1|AAZ57339.1| 806|Drosophila melanogaster RE44293p
protein.
Length = 806
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 483 VAHNNIQDLNEICHLVHLSNL 545
+A N+I DLNEIC L HLSNL
Sbjct: 171 LAKNSINDLNEICTLSHLSNL 191
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 404 LSLERNRIIDLRQCDRYLPSNL 469
L L NR+ LRQCD+ LP++L
Sbjct: 145 LYLHGNRLTHLRQCDKCLPTSL 166
>AE014134-686|AAN10364.2| 781|Drosophila melanogaster CG3980-PA,
isoform A protein.
Length = 781
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 483 VAHNNIQDLNEICHLVHLSNL 545
+A N+I DLNEIC L HLSNL
Sbjct: 171 LAKNSINDLNEICTLSHLSNL 191
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 404 LSLERNRIIDLRQCDRYLPSNL 469
L L NR+ LRQCD+ LP++L
Sbjct: 145 LYLHGNRLTHLRQCDKCLPTSL 166
>AE014134-685|AAF51055.3| 806|Drosophila melanogaster CG3980-PB,
isoform B protein.
Length = 806
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 483 VAHNNIQDLNEICHLVHLSNL 545
+A N+I DLNEIC L HLSNL
Sbjct: 171 LAKNSINDLNEICTLSHLSNL 191
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 404 LSLERNRIIDLRQCDRYLPSNL 469
L L NR+ LRQCD+ LP++L
Sbjct: 145 LYLHGNRLTHLRQCDKCLPTSL 166
>AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA
protein.
Length = 1427
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 397 SVSKFRKE--SYNRFASVRSLPTLEPRAFSASLTTTYRTST 513
S+ KF+ E + R S R L T PR A T YR T
Sbjct: 958 SIEKFKMELLARTRSPSPRDLETYHPRTMGAGTFTPYRAPT 998
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,252,265
Number of Sequences: 53049
Number of extensions: 401659
Number of successful extensions: 872
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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