Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32169
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82071-1|CAB04917.1| 209|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical p... 34 0.059
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 33 0.14
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 30 1.3
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 30 1.3
Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical p... 29 1.7
Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical p... 29 1.7
Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical p... 29 1.7
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical ... 29 1.7
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z69302-10|CAA93267.1| 295|Caenorhabditis elegans Hypothetical p... 29 2.2
Z47074-3|CAA87376.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF008590-1|AAB63299.1| 295|Caenorhabditis elegans paraquat resp... 29 2.2
U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 lik... 28 3.9
AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q ... 28 3.9
AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical ... 28 5.1
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 5.1
AC024200-16|AAF36003.1| 511|Caenorhabditis elegans Hypothetical... 28 5.1
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 27 8.9
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 8.9
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 8.9
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 8.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 8.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 8.9
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 8.9
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 8.9
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 8.9
>Z82071-1|CAB04917.1| 209|Caenorhabditis elegans Hypothetical
protein W05B5.1 protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.001
Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Frame = +2
Query: 110 DNPFRPDGDLSREADEIVSLIKGGKPITPTPPVAAPQLPT-DEHKEEKAEANNVNASLPA 286
+NPFRP+ L E D IV KP P+ P +A PT +H + A N P
Sbjct: 89 ENPFRPEEILYHEVDPIVEQYL-HKPFPPSRPGSAQNTPTKQQHFTQAATPPPTNHESPL 147
Query: 287 SPQTKVASPVLQTTPKAMNGTKNGAAVVEARAGXXXXXXXXXXXXXXXXXXTIRKKPKCK 466
Q ++ L K +G + + E KK KC
Sbjct: 148 YLQNGLSKEQLVQNEKNEHGNHSEPLLAEHNRNEEYVEDLPPAGKVELIHV---KKKKCG 204
Query: 467 CCAIQ 481
CC++Q
Sbjct: 205 CCSVQ 209
>Z46267-12|CAD45595.2| 528|Caenorhabditis elegans Hypothetical
protein F49E2.5g protein.
Length = 528
Score = 34.3 bits (75), Expect = 0.059
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +2
Query: 32 PLLSTVSDDMADNAVYNRQIIRESGWDNPFRPDGDLSREADEIVSLIKGGKPITPTP-PV 208
P T ++ A+ A ++I + N + + + + + +++ K +T P
Sbjct: 192 PEPKTPTNTPAEPAEQVQEITGKKNKKNKKKSESEATAAPASVEQVVEQPKVVTEEPHQQ 251
Query: 209 AAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGTK 352
AAPQ ++ + K+E+ NV PA+ +T V V TTP A K
Sbjct: 252 AAPQEKKNKKNKRKSESENV----PAASETPVEPVVESTTPPATENKK 295
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +2
Query: 77 YNRQIIRESGWDNPFRPDGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAE 256
YNR+ + +G P RP D +R A + PI PP +P H+++++
Sbjct: 68 YNRRFTQPNGAPYPLRPHSD-TRNAHRVY-------PIPVEPPQRVHSIPPVYHRQKRSY 119
Query: 257 ANNVNASLPASPQTKVASPV 316
A++V P K PV
Sbjct: 120 ASSVQQQKPPPVPIKQQVPV 139
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 185 PITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGTKNGAA 364
P+ P P VA P + + A A + A T+ ++ ++ TP A N +NGA
Sbjct: 282 PVKPKPFVARPAPSFGKPRAAVAPARAPQITQRAPAATRPSTSAIRVTPIAPNVVRNGAP 341
Query: 365 VVEARA 382
+A
Sbjct: 342 TTAQQA 347
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 188 ITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGTKNG 358
+TP PP P T+ H+ E V A L P+T V T ++ NG+ G
Sbjct: 283 VTPPPPRLLPAATTESHQTEPV-LPRVGALLILVPETARQGSVSSGTSESSNGSVYG 338
>Z46267-15|CAI79255.1| 1100|Caenorhabditis elegans Hypothetical
protein F49E2.5j protein.
Length = 1100
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 155 EIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASP 313
EIV + K ITP+ AA P + K +K + N+ + S PA+ K +P
Sbjct: 712 EIVEEVFEKKTITPSTAAAAAPAPGSK-KNKKNKKNSESESAPAAEPVKEVTP 763
>Z46267-14|CAI79254.1| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5i protein.
Length = 1030
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 155 EIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASP 313
EIV + K ITP+ AA P + K +K + N+ + S PA+ K +P
Sbjct: 642 EIVEEVFEKKTITPSTAAAAAPAPGSK-KNKKNKKNSESESAPAAEPVKEVTP 693
>Z46267-13|CAH04746.1| 845|Caenorhabditis elegans Hypothetical
protein F49E2.5h protein.
Length = 845
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 155 EIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASP 313
EIV + K ITP+ AA P + K +K + N+ + S PA+ K +P
Sbjct: 457 EIVEEVFEKKTITPSTAAAAAPAPGSK-KNKKNKKNSESESAPAAEPVKEVTP 508
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 155 EIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASP 313
EIV + K ITP+ AA P + K +K + N+ + S PA+ K +P
Sbjct: 501 EIVEEVFEKKTITPSTAAAAAPAPGSK-KNKKNKKNSESESAPAAEPVKEVTP 552
>Z46267-8|CAA86424.2| 1030|Caenorhabditis elegans Hypothetical
protein F49E2.5c protein.
Length = 1030
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 155 EIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASP 313
EIV + K ITP+ AA P + K +K + N+ + S PA+ K +P
Sbjct: 642 EIVEEVFEKKTITPSTAAAAAPAPGSK-KNKKNKKNSESESAPAAEPVKEVTP 693
>Z46267-7|CAA86429.2| 947|Caenorhabditis elegans Hypothetical
protein F49E2.5b protein.
Length = 947
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 155 EIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASP 313
EIV + K ITP+ AA P + K +K + N+ + S PA+ K +P
Sbjct: 559 EIVEEVFEKKTITPSTAAAAAPAPGSK-KNKKNKKNSESESAPAAEPVKEVTP 610
>Z46267-6|CAA86428.2| 1215|Caenorhabditis elegans Hypothetical
protein F49E2.5a protein.
Length = 1215
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 155 EIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASP 313
EIV + K ITP+ AA P + K +K + N+ + S PA+ K +P
Sbjct: 827 EIVEEVFEKKTITPSTAAAAAPAPGSK-KNKKNKKNSESESAPAAEPVKEVTP 878
>AF047661-4|AAC04435.2| 931|Caenorhabditis elegans Hypothetical
protein M70.1 protein.
Length = 931
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 185 PITPTPPVA-APQLPTDEHKEEKAEANNVNASLPASPQTKV 304
P+ PTP A P P K+EK + NV + P+T+V
Sbjct: 828 PVNPTPQTAKVPVAPAPPAKDEKPKDVNVKKAETEKPKTEV 868
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 179 GKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPV 316
G+P TP P AAP+ PT++ E +A+ + PA+ Q +VA PV
Sbjct: 23 GQPYTPQPEQAAPE-PTEDW-EAQADTS------PAAVQPEVAEPV 60
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/93 (22%), Positives = 31/93 (33%)
Frame = +2
Query: 53 DDMADNAVYNRQIIRESGWDNPFRPDGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTD 232
DD ++ N+ D P DG + A S + PPV P L T
Sbjct: 236 DDNGTSSFTNKTSTTTPAADEPLNLDGGDPKPATMKESNTTADPVVLTNPPVVVPVLATS 295
Query: 233 EHKEEKAEANNVNASLPASPQTKVASPVLQTTP 331
E + A +P +P ++ P P
Sbjct: 296 EEPNDTTAA----PVMPPNPPVGISGPATSEEP 324
>Z69302-10|CAA93267.1| 295|Caenorhabditis elegans Hypothetical
protein F40F8.7 protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 176 GGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLP 283
G P T +PP P+LPT + A+ VN P
Sbjct: 9 GSPPATSSPPTTMPKLPTIQDMLNNIGASTVNLMQP 44
>Z47074-3|CAA87376.1| 295|Caenorhabditis elegans Hypothetical
protein F40F8.7 protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 176 GGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLP 283
G P T +PP P+LPT + A+ VN P
Sbjct: 9 GSPPATSSPPTTMPKLPTIQDMLNNIGASTVNLMQP 44
>AF008590-1|AAB63299.1| 295|Caenorhabditis elegans paraquat
responsive protein protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 176 GGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLP 283
G P T +PP P+LPT + A+ VN P
Sbjct: 9 GSPPATSSPPTTMPKLPTIQDMLNNIGASTVNLMQP 44
>U58757-12|AAK66021.1| 60|Caenorhabditis elegans Histone h1 like
protein 7, isoformc protein.
Length = 60
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 239 KEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGTKNGAA 364
K +K A+ P +P+ K ASP PKA K AA
Sbjct: 6 KAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAA 47
>AF216291-1|AAF23175.1| 60|Caenorhabditis elegans histone H1.Q
protein.
Length = 60
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 239 KEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGTKNGAA 364
K +K A+ P +P+ K ASP PKA K AA
Sbjct: 6 KAKKVAKTKKVAAKPKAPKVKKASPKKAAAPKAKKPVKKAAA 47
>AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical
protein F33D11.2 protein.
Length = 408
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +2
Query: 188 ITPTPPVAAPQLPTDEH------KEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGT 349
ITP PP AP P E+ +++K+ A S PA P+ V P+ K GT
Sbjct: 70 ITPLPPSPAPVTPVLENAKPRTIRKQKSTAEIELDSKPAEPKI-VKQPIPAANLKGQLGT 128
Query: 350 K 352
K
Sbjct: 129 K 129
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 185 PITPTPPVAAPQLPTDEHKEEKAEANNVNA-SLPASPQTKVASPVLQTTPKAMNGT 349
P TPT + P PT + S P +P T +SP TT K + T
Sbjct: 400 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTTPTTMKTSSIT 455
>AC024200-16|AAF36003.1| 511|Caenorhabditis elegans Hypothetical
protein Y71F9AL.2 protein.
Length = 511
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 113 NPFRPDGDLSREADEIVSLIKGGK 184
NP R + D+ R+ DEI S++K K
Sbjct: 351 NPTRLNADMRRQLDEIYSMLKASK 374
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 215 PQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPKAMNGT 349
P P++E +E+ ++ S PA+P+T + L+ T ++N T
Sbjct: 192 PVRPSNEPEEKDYKSEGDPESRPATPKTPLTPDYLENTIVSLNET 236
>Z49126-1|CAA88938.2| 605|Caenorhabditis elegans Hypothetical
protein DH11.1 protein.
Length = 605
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 24 YTPPCCPQSATIWRITLCTTD 86
Y P QS +W ++LCT D
Sbjct: 176 YIPQLARQSPNLWAVSLCTVD 196
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 176 GGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPK 334
G P P P V P+ DE +E +A +NN N S ++ P +T K
Sbjct: 31 GSAPTVPPPAVPPPESSADE-EEPRASSNN-NYSSTSTVAAPTREPTRVSTLK 81
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 176 GGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVLQTTPK 334
G P P P V P+ DE +E +A +NN N S ++ P +T K
Sbjct: 31 GSAPTVPPPAVPPPESSADE-EEPRASSNN-NYSSTSTVAAPTREPTRVSTLK 81
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 140 SREADEIVSLIKGGKPITP-TPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPV 316
S+E D IV P PP ++PT+E KE + V A P T V PV
Sbjct: 193 SKEHDPIVPPTPIKNPAKKWKPPWEDDEVPTEEIKEPEPATRKVPALKKKEPSTSV-KPV 251
Query: 317 LQTTP 331
+P
Sbjct: 252 SDPSP 256
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 74 VYNRQIIRESGWDNPFRP---DGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKE 244
VY+ + E G D+PF P D + E +V I P+ PT P +P + K+
Sbjct: 1730 VYDLPDVEERGEDSPFSPKNLSDDFNGEHSPLV--ITPSLPVPPTHGSPRPLMPCETTKD 1787
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 74 VYNRQIIRESGWDNPFRP---DGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKE 244
VY+ + E G D+PF P D + E +V I P+ PT P +P + K+
Sbjct: 1764 VYDLPDVEERGEDSPFSPKNLSDDFNGEHSPLV--ITPSLPVPPTHGSPRPLMPCETTKD 1821
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +2
Query: 140 SREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVL 319
S+E E+ + + P P +AP + K E+ + PA + PV
Sbjct: 5125 SKETSEVQQVEIIEQKDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQKVVPVP 5184
Query: 320 QTTPKAMNGTKNGAAVVEAR 379
+T+ + T A VE++
Sbjct: 5185 ETSAPTVEPTVEKLAPVESK 5204
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +2
Query: 140 SREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVL 319
S+E E+ + + P P +AP + K E+ + PA + PV
Sbjct: 5125 SKETSEVQQVEIIEQKDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQKVVPVP 5184
Query: 320 QTTPKAMNGTKNGAAVVEAR 379
+T+ + T A VE++
Sbjct: 5185 ETSAPTVEPTVEKLAPVESK 5204
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +2
Query: 140 SREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKEEKAEANNVNASLPASPQTKVASPVL 319
S+E E+ + + P P +AP + K E+ + PA + PV
Sbjct: 5125 SKETSEVQQVEIIEQKDVPVPETSAPTVEPTVEKHAPVESKETSEVQPAEIVEQKVVPVP 5184
Query: 320 QTTPKAMNGTKNGAAVVEAR 379
+T+ + T A VE++
Sbjct: 5185 ETSAPTVEPTVEKLAPVESK 5204
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 74 VYNRQIIRESGWDNPFRP---DGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKE 244
VY+ + E G D+PF P D + E +V I P+ PT P +P + K+
Sbjct: 1846 VYDLPDVEERGEDSPFSPKNLSDDFNGEHSPLV--ITPSLPVPPTHGSPRPLMPCETTKD 1903
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 74 VYNRQIIRESGWDNPFRP---DGDLSREADEIVSLIKGGKPITPTPPVAAPQLPTDEHKE 244
VY+ + E G D+PF P D + E +V I P+ PT P +P + K+
Sbjct: 1794 VYDLPDVEERGEDSPFSPKNLSDDFNGEHSPLV--ITPSLPVPPTHGSPRPLMPCETTKD 1851
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,098,916
Number of Sequences: 27780
Number of extensions: 275420
Number of successful extensions: 1212
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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