Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32164
         (402 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76...    29   1.8  
12_02_0508 + 19820288-19821031,19822612-19822860,19823166-198232...    26   9.7  
11_02_0062 - 7909343-7909413,7909509-7910974,7911064-7912088,791...    26   9.7  
01_06_1413 + 37149038-37149295,37149392-37149603,37149687-371499...    26   9.7  
01_06_0922 - 33022709-33023545                                         26   9.7  

>09_01_0042 +
           764349-764763,764853-764902,765096-765172,766179-766236,
           767481-767607,768665-768769,768842-769424,769470-769775,
           770048-770139,770391-770440
          Length = 620

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 357 ELXPFSGSDFDFLTEGTTPSSAVLEPGPF 271
           E+ P SGS F+FLTE T  S     PG +
Sbjct: 354 EMMPVSGSPFNFLTETTIGSRIDQVPGGY 382


>12_02_0508 +
           19820288-19821031,19822612-19822860,19823166-19823288,
           19826916-19827146
          Length = 448

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 287 KTAELGVVPSVKKSKSDPEKGXNSEKADFERAIELTGY 400
           K  E+ VVP++     D  +  N  + DF+  I  TGY
Sbjct: 326 KNGEIKVVPAIHCFTEDGVEFVNGCREDFDAVIFATGY 363


>11_02_0062 -
           7909343-7909413,7909509-7910974,7911064-7912088,
           7912300-7912809,7913418-7913441,7913617-7913673
          Length = 1050

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
 Frame = -1

Query: 393 VSSIARSKSAFSELXPFSGSDFDFLTE---GTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 223
           + S+ RS  A + L P+S +    L     G   S++    GP     P T +     GP
Sbjct: 127 LGSLGRSLPASALLPPYSSASTPLLIRLPGGQADSTSAPSLGPAVGNEPTTPK---GQGP 183

Query: 222 GSVSTILCGRAALYGGRGDTQTSLTGGS 139
                +L  RAA  G +   QT+ TGGS
Sbjct: 184 RR-GFVLMSRAASTGTQIPPQTAGTGGS 210


>01_06_1413 +
           37149038-37149295,37149392-37149603,37149687-37149951,
           37150099-37150407
          Length = 347

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -3

Query: 298 LGGFGTWAV*L*IPFYITIVRILGPRVSFYHPMRA 194
           +GG+  W+    IP+ +  V ++ P V+++ PM A
Sbjct: 142 MGGYVAWSCLNYIPYRLAGVALVVPAVNYWWPMPA 176


>01_06_0922 - 33022709-33023545
          Length = 278

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 142 TPSERRLSVPATTIQSRPP 198
           TP +RR + PA ++Q +PP
Sbjct: 190 TPEQRRAASPAPSLQRKPP 208


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,778,358
Number of Sequences: 37544
Number of extensions: 253822
Number of successful extensions: 661
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)