Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32157
         (332 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308...    28   2.1  
02_02_0396 - 9756993-9757540,9757590-9757809,9757929-9758046,975...    27   2.8  
02_01_0622 - 4658133-4658150,4658269-4658337,4658436-4658462,465...    27   2.8  
01_02_0074 + 10869546-10871373,10871449-10872077                       27   2.8  
09_06_0281 + 22014394-22015534,22016041-22017056                       27   4.9  
08_02_0933 + 22740123-22740364,22741952-22742390,22743060-227431...    26   6.4  
03_06_0490 + 34289904-34289967,34291912-34292237,34292401-342925...    26   6.4  

>01_01_0409 -
           3084821-3084988,3085069-3085155,3085270-3085476,
           3085904-3085985,3086085-3086275,3086410-3086616,
           3086709-3086871,3087905-3087960,3088035-3088148,
           3088599-3089807
          Length = 827

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = -3

Query: 252 QSCIKLPRFRRNI--YRCTLASKRFQ*PGGNECQSKLIARIHYCRDYC 115
           Q  + +P F  ++   R  L SKR Q P  N C + L    HYC   C
Sbjct: 497 QEVVLVPCFGHHLGQERAILCSKRRQFPCQNLCGNPLNCGNHYCTKAC 544


>02_02_0396 -
           9756993-9757540,9757590-9757809,9757929-9758046,
           9758156-9758431,9758569-9758609
          Length = 400

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 66  HIPQSCVLIDYRFSSRPA 13
           ++P SCVL+DY  +SR A
Sbjct: 82  YLPASCVLVDYEIASRIA 99


>02_01_0622 -
           4658133-4658150,4658269-4658337,4658436-4658462,
           4658808-4658873,4658954-4659076,4659562-4659629,
           4659703-4659766,4659994-4660135,4660218-4660306,
           4660574-4660637,4660870-4661021,4661124-4661261,
           4661742-4661867,4661971-4662183,4662343-4662426,
           4662583-4662742,4662993-4663126,4664047-4664136,
           4664313-4664471,4665528-4665611,4666170-4666289,
           4666338-4666391,4666899-4666945,4667556-4667598,
           4667730-4668586,4668845-4668899
          Length = 1081

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 163 MPIEINRTHSLLSRLLPHAHYHITQRYDPPTK-THSPV 53
           +P  +N  H + S++      H+T   DPP++  H P+
Sbjct: 165 VPSSLNEGHGVSSKIAAPKEEHVTPTMDPPSRCEHLPL 202


>01_02_0074 + 10869546-10871373,10871449-10872077
          Length = 818

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 46  DA*LGNVSSLEGRIFVLYDNVREAIIATVMNACD 147
           D  LG+      R+   YD VR+ + +T ++ACD
Sbjct: 470 DVMLGDYRGKPCRVVTPYDGVRKVVSSTSVHACD 503


>09_06_0281 + 22014394-22015534,22016041-22017056
          Length = 718

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +3

Query: 45  GRMTGECVFVGGSYLCVI**CA*GNNRDSNECVRL---ISIGI 164
           GR  GEC    G Y C     A G+ R  N CV+    +S+GI
Sbjct: 344 GRCYGECTNTPGDYQCRCPRGARGDPRIPNGCVKTNLGLSVGI 386


>08_02_0933 +
           22740123-22740364,22741952-22742390,22743060-22743172,
           22743470-22743575
          Length = 299

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 89  KIRPSNEDTFPSHASSLTIGLAA 21
           +  PSN+ T PSH  SL+ G A+
Sbjct: 144 RFAPSNQATLPSHRGSLSQGPAS 166


>03_06_0490 +
           34289904-34289967,34291912-34292237,34292401-34292536,
           34292651-34292793,34292880-34293003,34293562-34293963,
           34294121-34294176
          Length = 416

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 131 TVAIIASRTLSYNTKIRPSNE 69
           TVA +A   LSY  K+RPS E
Sbjct: 334 TVATLALECLSYEAKMRPSME 354


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,686,163
Number of Sequences: 37544
Number of extensions: 191534
Number of successful extensions: 367
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)