Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32151
         (660 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DD79BD Cluster: PREDICTED: hypothetical protein;...    36   1.1  
UniRef50_Q5VN32 Cluster: Putative uncharacterized protein OSJNBa...    34   2.6  
UniRef50_Q16XE7 Cluster: Host cell factor C1; n=1; Aedes aegypti...    34   2.6  
UniRef50_UPI0000DD803F Cluster: PREDICTED: hypothetical protein;...    34   3.5  
UniRef50_UPI000049858C Cluster: hypothetical protein 101.t00009;...    34   3.5  
UniRef50_Q4TD57 Cluster: Chromosome undetermined SCAF6493, whole...    34   3.5  
UniRef50_Q1PZJ0 Cluster: Similar to flagellar motor protein MotB...    33   4.6  
UniRef50_UPI0001555F59 Cluster: PREDICTED: hypothetical protein,...    33   8.0  
UniRef50_UPI0000EBE4B9 Cluster: PREDICTED: hypothetical protein;...    33   8.0  
UniRef50_UPI0000EBCB0E Cluster: PREDICTED: similar to Kelch doma...    33   8.0  

>UniRef50_UPI0000DD79BD Cluster: PREDICTED: hypothetical protein;
           n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 239

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 110 YPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGV 220
           +PPPT AP  +P+ LP R  PT        PA  PG+
Sbjct: 174 HPPPTPAPAPAPSPLPSRLRPTEHAQPRSPPA--PGI 208


>UniRef50_Q5VN32 Cluster: Putative uncharacterized protein
           OSJNBa0015G09.12; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0015G09.12 - Oryza sativa subsp. japonica (Rice)
          Length = 463

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 92  LLPEARYP-PPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKP 232
           L+ +A Y  PPTD+ G SP  LP R+ PT+  +      + PGVL +P
Sbjct: 334 LVVQALYADPPTDS-GASPPLLPRRSTPTSPRTQGFCLPRCPGVLCRP 380


>UniRef50_Q16XE7 Cluster: Host cell factor C1; n=1; Aedes
           aegypti|Rep: Host cell factor C1 - Aedes aegypti
           (Yellowfever mosquito)
          Length = 1735

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 113 PPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPV 235
           PPPT     +PA +P  T PT   +A   PA  P  +A P+
Sbjct: 408 PPPTPPAAPAPAPVPSIT-PTPAAAAAASPAHTPAAIASPI 447


>UniRef50_UPI0000DD803F Cluster: PREDICTED: hypothetical protein;
           n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 602

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 23/75 (30%), Positives = 30/75 (40%)
 Frame = +2

Query: 5   PPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARX 184
           PPA       + P  TQ   +ER+      LP  R P P       P K   R +P+A  
Sbjct: 430 PPAHTKSGWRLQPDCTQYPGQERFRMSARFLPPCRSPIPRPHHLFLPPKPKERGDPSAEE 489

Query: 185 SAHRGPAQVPGVLAK 229
           +  RG     G +AK
Sbjct: 490 TRERGVGSSGGCVAK 504


>UniRef50_UPI000049858C Cluster: hypothetical protein 101.t00009;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 101.t00009 - Entamoeba histolytica HM-1:IMSS
          Length = 863

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
 Frame = +2

Query: 8   PAGFGPRRSISPAITQRGEKERYPWGV*-LLPEARYPPPTD--------APGGSPAKLPH 160
           P G  PR S +P    RG     P G   ++P  + P P +        AP G P  +P 
Sbjct: 189 PRGMPPRGSPAPRGMPRGGPRGAPRGRGGMMPPTQAPEPEEQETPVMHTAPRGMPRGMPS 248

Query: 161 RTEPTARXSAHRGPAQVP--GVLAKP 232
           R  PT R     GP   P  G++  P
Sbjct: 249 RGSPTPRGMPRGGPRGAPMGGMMPPP 274


>UniRef50_Q4TD57 Cluster: Chromosome undetermined SCAF6493, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF6493,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 62

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +1

Query: 91  TAPRGPLSATYGRARWKSSKTPPQDGTHGTQXCASGARPGP 213
           T+PR   SA   R+     ++PPQ    G + C SGARPGP
Sbjct: 5   TSPRHRQSALT-RSLGLGRRSPPQRSQTGRRLCPSGARPGP 44


>UniRef50_Q1PZJ0 Cluster: Similar to flagellar motor protein MotB;
           n=1; Candidatus Kuenenia stuttgartiensis|Rep: Similar to
           flagellar motor protein MotB - Candidatus Kuenenia
           stuttgartiensis
          Length = 223

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 11  AGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDA 130
           AGFGP R I+P  T  G+KE       +LP     PP +A
Sbjct: 180 AGFGPNRPIAPNTTPAGKKENRRVEFLILPTVASLPPKEA 219


>UniRef50_UPI0001555F59 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           hypothetical protein, partial - Ornithorhynchus anatinus
          Length = 604

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 20  GPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKL 154
           GP+R +SP   +RG  ER P      P +R P P     G PA++
Sbjct: 449 GPKRRVSPGAGRRGRTERRP-PAPTHPPSRNPSPVGGGRGLPAEM 492


>UniRef50_UPI0000EBE4B9 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 241

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +1

Query: 76  PLGSMTAPRGPLSATYGRARWKSSKTPPQDGTHGTQXCASGARPGPG 216
           P     A RG + A Y     +++ TPP+ G  GT   ASG  P  G
Sbjct: 100 PRTPRAAARGGVPARYAPGTERAALTPPRPGVAGTPFLASGQAPEVG 146


>UniRef50_UPI0000EBCB0E Cluster: PREDICTED: similar to Kelch domain
           containing 7B; n=1; Bos taurus|Rep: PREDICTED: similar
           to Kelch domain containing 7B - Bos taurus
          Length = 1150

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +1

Query: 4   SSCWFWSTSLNLSRHNTTRRE---GAIPLGSMTAPRGPLSATYGRARWKSSKTPPQDGTH 174
           S+ W    S+ L  H   R E   G  P  ++  P  P +A     R   S  PP++  H
Sbjct: 553 STSWGNLISMVLRSHPFPRPERPQGRAPRAALEGPSHPGAALSSENR--ESAAPPEEDRH 610

Query: 175 GTQXCASGARPGPGSLGE 228
           G +  A+  R GPG L E
Sbjct: 611 GAEDLAT--RAGPGGLEE 626


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,683,907
Number of Sequences: 1657284
Number of extensions: 15673750
Number of successful extensions: 46736
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 43058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46508
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)