Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32151
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0363 - 15172528-15173224,15174564-15174856 34 0.087
02_01_0007 - 48497-48880 31 0.81
01_01_0070 - 542603-542686,542803-543441 31 0.81
03_03_0132 + 14711645-14711839,14712641-14712970,14713689-147137... 31 1.1
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 30 1.4
05_03_0624 - 16319364-16320581 30 1.9
05_03_0599 + 16026042-16027259 30 1.9
08_01_0529 + 4589434-4589652,4589897-4589953,4590106-4590237 29 2.5
02_01_0302 - 2021221-2023305 29 2.5
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 29 3.3
05_05_0091 + 22319411-22320901 28 5.7
10_08_0316 - 16688911-16689044,16689141-16689211,16689303-166893... 28 7.6
10_02_0102 + 5314875-5315231 28 7.6
10_01_0105 + 1287423-1289924 28 7.6
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 28 7.6
09_02_0543 + 10427321-10428315,10428440-10429154 28 7.6
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 28 7.6
06_03_1358 - 29548440-29549315 28 7.6
06_01_0601 + 4337575-4340149,4340566-4340978 28 7.6
04_04_1513 - 34107700-34107765,34108475-34108551,34108640-341086... 28 7.6
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 7.6
02_03_0315 - 17610605-17610855,17611304-17611370,17612876-176129... 28 7.6
02_01_0794 - 5955763-5957238 28 7.6
01_06_1322 - 36290275-36291693,36291837-36291954,36292485-36292516 28 7.6
01_01_1162 - 9253034-9254229,9254387-9254456,9254473-9254567,925... 28 7.6
>06_02_0363 - 15172528-15173224,15174564-15174856
Length = 329
Score = 34.3 bits (75), Expect = 0.087
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 92 LLPEARYP-PPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKP 232
L+ +A Y PPTD+ G SP LP R+ PT+ + + PGVL +P
Sbjct: 200 LVVQALYADPPTDS-GASPPLLPRRSTPTSPRTQGFCLPRCPGVLCRP 246
>02_01_0007 - 48497-48880
Length = 127
Score = 31.1 bits (67), Expect = 0.81
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +2
Query: 92 LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSA 190
LLP YPPP G S + PH P A A
Sbjct: 80 LLPNLNYPPPPPHDGASSSSPPHLPRPPADADA 112
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 31.1 bits (67), Expect = 0.81
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +2
Query: 113 PPPTDAPGGSPAKLPHRT--EPTARXSAHRGPAQVP 214
PPP AP +PA LP T P A A PA+ P
Sbjct: 126 PPPVAAPAEAPAALPPATTPPPVAEAPAELPPAEAP 161
>03_03_0132 +
14711645-14711839,14712641-14712970,14713689-14713751,
14713833-14713906,14714004-14714099,14714705-14714759,
14714867-14714971,14715054-14715135,14715450-14715562,
14715717-14716118
Length = 504
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +1
Query: 25 TSLNLSRHNTTRREGAIPLGSMTAPRGPLSATYGRARWKSSKTPPQDGTHGTQXCASGAR 204
T LN+ H+ R+ IP G+M A P A W+ + PQ G G A
Sbjct: 366 TDLNVKAHSDKSRDYTIPQGAMQAVPQPPGVPTTSAGWQGN---PQAG--GAYAPPGAAA 420
Query: 205 PGPGSLGE 228
P G+ G+
Sbjct: 421 PNHGTTGQ 428
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +2
Query: 5 PPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARX 184
PPA P ++ P++ Q+ E+ P+G P YPP P P+ P+
Sbjct: 367 PPASANPSTAVPPSVHQQPEEVAAPYGP---PPQSYPPNVRLPS------PYVPPPSGPA 417
Query: 185 SAHRGPAQVPGVLAKPVI 238
GP PG+ P +
Sbjct: 418 PPFYGPN--PGMYEPPAV 433
>05_03_0624 - 16319364-16320581
Length = 405
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2
Query: 155 GVLLDFHRARP*VADNGPLGAVILPRGIAPSLL 57
G+L+D R R VAD+G G+ LP I PSLL
Sbjct: 179 GMLVDGERLR--VADDGGGGSAFLPPSILPSLL 209
>05_03_0599 + 16026042-16027259
Length = 405
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2
Query: 155 GVLLDFHRARP*VADNGPLGAVILPRGIAPSLL 57
G+L+D R R VAD+G G+ LP I PSLL
Sbjct: 179 GMLVDGERLR--VADDGGGGSAFLPPSILPSLL 209
>08_01_0529 + 4589434-4589652,4589897-4589953,4590106-4590237
Length = 135
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHR 196
P A PPP + GGSPA++ + A A R
Sbjct: 31 PHAGRPPPPSSGGGSPAEVAPAAKSVAEEKARR 63
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSP--AKLPHRTEPTARXSAHRGPAQVP 214
P + Y PP+ PG SP +P PT +H P+ P
Sbjct: 588 PSSGYQPPSGQPGASPPTQHVPGAGTPTTTPPSHSHPSTPP 628
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPG 217
P+ R+ PP + G P+ P P + S ++ P+ PG
Sbjct: 561 PDVRFAPPPGSYGPIPSTPPSSGSPPSPSSGYQPPSGQPG 600
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 95 LPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRG 199
LP PPP P SP+ HR P +R A RG
Sbjct: 4 LPPLPSPPPPPTPPPSPSNRNHR-HPASRVGAARG 37
>05_05_0091 + 22319411-22320901
Length = 496
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 130 RVRRWRITGLWEQSYSPGVSLLLSSLC 50
RVRR + LW QSY V L+ + C
Sbjct: 204 RVRRLKEESLWSQSYEKAVILMARAAC 230
>10_08_0316 -
16688911-16689044,16689141-16689211,16689303-16689354,
16689589-16689685,16689764-16689841,16689938-16690054,
16690172-16690276,16691026-16691100,16691297-16691356,
16691454-16691549,16691838-16691954,16692142-16692260,
16692349-16692490,16694204-16694290,16694852-16694914,
16695081-16695161
Length = 497
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 131 PGGSPAKLPHRTEPTARXSAHRGPAQVPGVLA 226
PG +P + TE SAHR QVP LA
Sbjct: 139 PGINPVMIDELTECNTMLSAHRKKRQVPPTLA 170
>10_02_0102 + 5314875-5315231
Length = 118
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Frame = +1
Query: 58 RREGAIPLG-SMTAPRGPLSATY----GRARWKSSKTPPQDGTHG-TQXCASGARPGPGS 219
+R GA S PR P SAT GR RW+ SKT T + A G G G
Sbjct: 19 KRRGAFSSSLSPRPPRSPHSATTVTRGGRRRWRRSKTATATSTAAEVEAAALGEDGGEGG 78
Query: 220 LG 225
G
Sbjct: 79 GG 80
>10_01_0105 + 1287423-1289924
Length = 833
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 4 SSCWFWS-TSLNLSRHNTTRREGAIP--LGSMTA 96
SSCWFW TS+ R + T G P LG M +
Sbjct: 275 SSCWFWKVTSIKSLRLDETYLHGPFPDELGEMVS 308
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVP 214
P++ PPP P P +P RT+ + +A P +P
Sbjct: 259 PQSVRPPPPPPPPPPPPPMPPRTDNASTQAAPAPPPPLP 297
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVP 214
P+ PPPT AP SPA P P GPA P
Sbjct: 41 PDMPPPPPTPAPQSSPAPPP---APDMTPPPGPGPAAAP 76
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAK-LPHRTEPTARXSAHRGPAQVPG 217
P + PPPT SPA P R TA SA G Q G
Sbjct: 211 PSPKQPPPTKPAAISPASPSPARCSATAAASAVPGRLQAQG 251
>06_03_1358 - 29548440-29549315
Length = 291
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 232 RFRQDSRDLGGP-PMRTXACRGFRPVGEFCWTSTGRVRRWRITGL 101
R R RD G P P R C GF P T TG R+ R G+
Sbjct: 164 RERNRGRDDGSPSPPRQACCFGFSPKKTLQRTPTGSGRKSRRAGV 208
>06_01_0601 + 4337575-4340149,4340566-4340978
Length = 995
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 110 YPPPTDAPGGSPAKLPHR 163
+PPP PGG PA HR
Sbjct: 741 HPPPPPPPGGKPAAKAHR 758
>04_04_1513 -
34107700-34107765,34108475-34108551,34108640-34108688,
34109144-34109218,34109447-34109554,34109728-34109835,
34110708-34111256
Length = 343
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 157 GEFCWTSTGRVRRWRITGLWEQSYSPGV 74
G+ CW V R TG W+ S + GV
Sbjct: 28 GQLCWAHIAHVERAAHTGWWKTSPTTGV 55
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLP 157
P+A PPP +AP G P ++P
Sbjct: 277 PQAPPPPPPNAPMGMPPRIP 296
>02_03_0315 -
17610605-17610855,17611304-17611370,17612876-17612941,
17613037-17613158,17613245-17613428,17614262-17614494,
17614580-17614913,17615043-17615186,17615303-17615344
Length = 480
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +2
Query: 38 SPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPG 217
+P + K+ Y V ++ EA P P A +PA P +P + A PA P
Sbjct: 236 APVSHEEAPKKSYASIVKVMKEAPVPAPIPATRPAPAARPAPPKPEKQSPA--PPAPAPV 293
Query: 218 VLAKPVIIKL**SLTIEP*VYAYKLII 298
A P S T EP V A+ + +
Sbjct: 294 ADATPFSSNAESSNTHEPEVDAHAIYV 320
>02_01_0794 - 5955763-5957238
Length = 491
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -1
Query: 636 VVRKMHIPQLN*GNVECFSRCCEY-ASVHGLVEQI 535
V R + IP+L CF C+ A VHGL EQI
Sbjct: 139 VARSLGIPRLFFHGPSCFYSLCDLNAVVHGLHEQI 173
>01_06_1322 - 36290275-36291693,36291837-36291954,36292485-36292516
Length = 522
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 130 RVRRWRITGLWEQSYSPGVSLLLSSLC 50
+VRR + LW QSY V L+ + C
Sbjct: 247 KVRRLKEESLWNQSYEKAVGLMARAAC 273
>01_01_1162 -
9253034-9254229,9254387-9254456,9254473-9254567,
9255344-9255487,9255514-9255622
Length = 537
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 113 PPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKP 232
PPP PGGS A H T+P R A G + P
Sbjct: 210 PPPPRCPGGSAADR-HMTQPPRRPDATETTTAFLGAASTP 248
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,316,897
Number of Sequences: 37544
Number of extensions: 436187
Number of successful extensions: 1466
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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