Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32151
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related matrix-... 32 1.6
AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related matrix-... 32 1.6
U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa s... 32 2.1
BC024157-1|AAH24157.1| 779|Homo sapiens pleckstrin homology dom... 32 2.1
BC023585-1|AAH23585.1| 704|Homo sapiens TNF receptor-associated... 32 2.1
BC018950-1|AAH18950.1| 704|Homo sapiens TNF receptor-associated... 32 2.1
BC001455-1|AAH01455.2| 699|Homo sapiens TRAP1 protein protein. 32 2.1
AY007233-1|AAG01896.1| 779|Homo sapiens phosphoinositol 3-phosp... 32 2.1
AK223205-1|BAD96925.1| 704|Homo sapiens TNF receptor-associated... 32 2.1
AK223076-1|BAD96796.1| 704|Homo sapiens TNF receptor-associated... 32 2.1
AK223049-1|BAD96769.1| 704|Homo sapiens TNF receptor-associated... 32 2.1
AK093344-1|BAC04139.1| 579|Homo sapiens protein ( Homo sapiens ... 32 2.1
AF154108-1|AAF15314.1| 704|Homo sapiens tumor necrosis factor t... 32 2.1
AB209805-1|BAD93042.1| 703|Homo sapiens TNF receptor-associated... 32 2.1
AB208908-1|BAD92145.1| 382|Homo sapiens Pleckstrin homology dom... 32 2.1
BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding doma... 31 3.6
AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens ... 31 3.6
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 31 3.6
AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein. 31 3.6
BC017259-1|AAH17259.1| 690|Homo sapiens rabphilin 3A homolog (m... 31 4.8
BC009843-1|AAH09843.1| 621|Homo sapiens Unknown (protein for IM... 31 4.8
BC002605-1|AAH02605.1| 607|Homo sapiens Unknown (protein for IM... 31 4.8
AB023202-1|BAA76829.2| 697|Homo sapiens KIAA0985 protein protein. 31 4.8
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 30 6.4
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 30 6.4
BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6, ... 30 6.4
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 30 6.4
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 30 6.4
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 30 6.4
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 30 6.4
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 30 6.4
AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein. 30 6.4
AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein. 30 6.4
AB065572-1|BAC05806.1| 161|Homo sapiens seven transmembrane hel... 30 6.4
M26637-1|AAA59584.1| 66|Homo sapiens CES1 protein. 30 8.4
BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein. 30 8.4
BC071848-1|AAH71848.1| 343|Homo sapiens RTN4 protein protein. 30 8.4
BC068991-1|AAH68991.1| 373|Homo sapiens reticulon 4 protein. 30 8.4
BC026788-1|AAH26788.1| 373|Homo sapiens reticulon 4 protein. 30 8.4
BC016165-1|AAH16165.1| 392|Homo sapiens reticulon 4 protein. 30 8.4
BC012619-1|AAH12619.1| 373|Homo sapiens reticulon 4 protein. 30 8.4
BC010737-1|AAH10737.1| 373|Homo sapiens reticulon 4 protein. 30 8.4
AY102285-3|AAM64241.1| 373|Homo sapiens RTN4 protein. 30 8.4
AY102285-2|AAM64242.1| 392|Homo sapiens RTN4 protein. 30 8.4
AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein. 30 8.4
AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein. 30 8.4
AY102278-1|AAM64247.1| 392|Homo sapiens RTN4 isoform B2 protein. 30 8.4
AY102277-1|AAM64246.1| 373|Homo sapiens RTN4 isoform B1 protein. 30 8.4
AJ251384-1|CAB99249.1| 373|Homo sapiens Nogo-B protein protein. 30 8.4
AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein. 30 8.4
AF148538-1|AAG12177.1| 373|Homo sapiens reticulon 4b protein. 30 8.4
AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein. 30 8.4
AF132047-1|AAD31021.1| 373|Homo sapiens foocen-m protein. 30 8.4
AC093165-1|AAY24029.1| 185|Homo sapiens unknown protein. 30 8.4
AB040463-1|BAB18928.1| 373|Homo sapiens RTN-xS protein. 30 8.4
AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein. 30 8.4
AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein. 30 8.4
>AB209293-1|BAD92530.1| 1156|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1156
Score = 32.3 bits (70), Expect = 1.6
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +2
Query: 5 PPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGG--SPAKLPH-RTEPT 175
PP GP I A + G +++ P G P+ PP P G P+ P+ +T P+
Sbjct: 1038 PPGSLGPSEQIGQAGSTAGPQQQQPAGA---PQPGAVPPGVPPPGPHGPSPFPNQQTPPS 1094
Query: 176 ARXSAHRGPAQVPGVLAK-PVII 241
A G PGV A+ P I+
Sbjct: 1095 MMPGAVPGSGH-PGVAAQSPAIV 1116
>AB209006-1|BAD92243.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
c2 iso protein.
Length = 1164
Score = 32.3 bits (70), Expect = 1.6
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +2
Query: 5 PPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGG--SPAKLPH-RTEPT 175
PP GP I A + G +++ P G P+ PP P G P+ P+ +T P+
Sbjct: 1046 PPGSLGPSEQIGQAGSTAGPQQQQPAGA---PQPGAVPPGVPPPGPHGPSPFPNQQTPPS 1102
Query: 176 ARXSAHRGPAQVPGVLAK-PVII 241
A G PGV A+ P I+
Sbjct: 1103 MMPGAVPGSGH-PGVAAQSPAIV 1124
>U66616-1|AAC50694.1| 1213|Homo sapiens SWI/SNF complex 170 KDa
subunit protein.
Length = 1213
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 5 PPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGG--SPAKLPH-RTEPT 175
PP GP I A + RG +++ P G P+ PP P G P+ P+ +T P+
Sbjct: 1003 PPGSLGPSEQIGQAGSTRGPQQQQPAGA---PQPGAVPPGVPPPGPHGPSPFPNQQTPPS 1059
Query: 176 ARXSAHRGPAQVPGV 220
A G PGV
Sbjct: 1060 MMPGAVPGSGH-PGV 1073
>BC024157-1|AAH24157.1| 779|Homo sapiens pleckstrin homology domain
containing, family A (phosphoinositide binding speci
protein.
Length = 779
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRG-------PAQVPGVLAKPVII 241
P R PP++A GG P + P R AH G P + PG A V++
Sbjct: 295 PTPRRGPPSEAGGGKPPRSPQHWSQEPRTQAHSGSPTYLQLPPRPPGTRASMVLL 349
>BC023585-1|AAH23585.1| 704|Homo sapiens TNF receptor-associated
protein 1 protein.
Length = 704
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 11 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 50
>BC018950-1|AAH18950.1| 704|Homo sapiens TNF receptor-associated
protein 1 protein.
Length = 704
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 11 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 50
>BC001455-1|AAH01455.2| 699|Homo sapiens TRAP1 protein protein.
Length = 699
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 6 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 45
>AY007233-1|AAG01896.1| 779|Homo sapiens phosphoinositol
3-phosphate binding protein-1 protein.
Length = 779
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRG-------PAQVPGVLAKPVII 241
P R PP++A GG P + P R AH G P + PG A V++
Sbjct: 295 PTPRRGPPSEAGGGKPPRSPQHWSQEPRTQAHSGSPTYLQLPPRPPGTRASMVLL 349
>AK223205-1|BAD96925.1| 704|Homo sapiens TNF receptor-associated
protein 1 variant protein.
Length = 704
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 11 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 50
>AK223076-1|BAD96796.1| 704|Homo sapiens TNF receptor-associated
protein 1 variant protein.
Length = 704
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 11 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 50
>AK223049-1|BAD96769.1| 704|Homo sapiens TNF receptor-associated
protein 1 variant protein.
Length = 704
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 11 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 50
>AK093344-1|BAC04139.1| 579|Homo sapiens protein ( Homo sapiens
cDNA FLJ36025 fis, clone TESTI2016701, highly similar to
TUMOR NECROSIS FACTOR TYPE 1 RECEPTOR ASSOCIATED
PROTEIN. ).
Length = 579
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 11 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 50
>AF154108-1|AAF15314.1| 704|Homo sapiens tumor necrosis factor type
1 receptor associated protein protein.
Length = 704
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 11 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 50
>AB209805-1|BAD93042.1| 703|Homo sapiens TNF receptor-associated
protein 1 variant protein.
Length = 703
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 80 WGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPA 205
WG L P R P PGG P P RT TA+ R PA
Sbjct: 10 WGRRLRPLLRAPALAAVPGGKPILCPRRT--TAQLGPRRNPA 49
>AB208908-1|BAD92145.1| 382|Homo sapiens Pleckstrin homology
domain-containing protein family A member 4 variant
protein.
Length = 382
Score = 31.9 bits (69), Expect = 2.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRG-------PAQVPGVLAKPVII 241
P R PP++A GG P + P R AH G P + PG A V++
Sbjct: 265 PTPRRGPPSEAGGGKPPRSPQHWSQEPRTQAHSGSPTYLQLPPRPPGTRASMVLL 319
>BC065530-1|AAH65530.1| 1003|Homo sapiens methyl-CpG binding domain
protein 6 protein.
Length = 1003
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 101 EARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVIIK 244
+A PPP GSP + H +P+ + + VPG A P K
Sbjct: 436 DAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASK 483
>AK093078-1|BAC04045.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ35759 fis, clone TESTI2004737. ).
Length = 710
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 101 EARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVIIK 244
+A PPP GSP + H +P+ + + VPG A P K
Sbjct: 142 DAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASK 189
>AK056399-1|BAB71176.1| 1003|Homo sapiens protein ( Homo sapiens
cDNA FLJ31837 fis, clone NT2RP7000069, weakly similar to
MUCIN 1 PRECURSOR. ).
Length = 1003
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 101 EARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVIIK 244
+A PPP GSP + H +P+ + + VPG A P K
Sbjct: 436 DAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASK 483
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 31.1 bits (67), Expect = 3.6
Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERY-PWGV*LLPEARYPPPTD-APGGSPAKLPHRTEP 172
+PPA P R P GE E P LP+ + PPP AP P LPHR P
Sbjct: 195 LPPAHPPPDRK-PPLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPP 252
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 95 LPEARYPPPTDAPGGSPAKLP 157
LP A YPPP PGG P P
Sbjct: 370 LPPASYPPPAVPPGGQPPVPP 390
>AB067474-1|BAB67780.1| 967|Homo sapiens KIAA1887 protein protein.
Length = 967
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 101 EARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVIIK 244
+A PPP GSP + H +P+ + + VPG A P K
Sbjct: 400 DAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASK 447
>BC017259-1|AAH17259.1| 690|Homo sapiens rabphilin 3A homolog
(mouse) protein.
Length = 690
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 145 SKTPPQDGTHGTQXCASGARPGPGSLGETCDYK 243
S PPQ G GT G+RPGPG G D K
Sbjct: 281 SPAPPQPGQPGTP---GGSRPGPGPAGRFPDQK 310
>BC009843-1|AAH09843.1| 621|Homo sapiens Unknown (protein for
IMAGE:3944479) protein.
Length = 621
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 145 SKTPPQDGTHGTQXCASGARPGPGSLGETCDYK 243
S PPQ G GT G+RPGPG G D K
Sbjct: 281 SPAPPQPGQPGTP---GGSRPGPGPAGRFPDQK 310
>BC002605-1|AAH02605.1| 607|Homo sapiens Unknown (protein for
IMAGE:3160482) protein.
Length = 607
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 145 SKTPPQDGTHGTQXCASGARPGPGSLGETCDYK 243
S PPQ G GT G+RPGPG G D K
Sbjct: 281 SPAPPQPGQPGTP---GGSRPGPGPAGRFPDQK 310
>AB023202-1|BAA76829.2| 697|Homo sapiens KIAA0985 protein protein.
Length = 697
Score = 30.7 bits (66), Expect = 4.8
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +1
Query: 145 SKTPPQDGTHGTQXCASGARPGPGSLGETCDYK 243
S PPQ G GT G+RPGPG G D K
Sbjct: 288 SPAPPQPGQPGTP---GGSRPGPGPAGRFPDQK 317
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVII 241
P R PP PG P +P R P H GP G+ P ++
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVII 241
P R PP PG P +P R P H GP G+ P ++
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
>BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6,
member B (zinc finger protein) protein.
Length = 480
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 77 PWGV*LLP-EARYP-PPTDAPGGSPAKLP-HRTEPTARXSAHRGP 202
P G+ L P EA P PPT P GSP + H PT S +GP
Sbjct: 137 PLGISLRPLEAEPPTPPTAPPPGSPRRSEGHPDPPTESRSCSQGP 181
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVII 241
P R PP PG P +P R P H GP G+ P ++
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVII 241
P R PP PG P +P R P H GP G+ P ++
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVII 241
P R PP PG P +P R P H GP G+ P ++
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVII 241
P R PP PG P +P R P H GP G+ P ++
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 30.3 bits (65), Expect = 6.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKPVII 241
P R PP PG P +P R P H GP G+ P ++
Sbjct: 333 PPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLM 380
>AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 77 PWGV*LLP-EARYP-PPTDAPGGSPAKLP-HRTEPTARXSAHRGP 202
P G+ L P EA P PPT P GSP + H PT S +GP
Sbjct: 137 PLGISLRPLEAEPPTPPTAPPPGSPRRSEGHPDPPTESRSCSQGP 181
>AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 30.3 bits (65), Expect = 6.4
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 77 PWGV*LLP-EARYP-PPTDAPGGSPAKLP-HRTEPTARXSAHRGP 202
P G+ L P EA P PPT P GSP + H PT S +GP
Sbjct: 137 PLGISLRPLEAEPPTPPTAPPPGSPRRSEGHPDPPTESRSCSQGP 181
>AB065572-1|BAC05806.1| 161|Homo sapiens seven transmembrane helix
receptor protein.
Length = 161
Score = 30.3 bits (65), Expect = 6.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 145 SKTPPQDGTHGTQXCASGARPGPGSLGE 228
+K PP+ G + CA G RPGPG GE
Sbjct: 121 TKWPPR-GRLPSMPCARGTRPGPGGEGE 147
>M26637-1|AAA59584.1| 66|Homo sapiens CES1 protein.
Length = 66
Score = 29.9 bits (64), Expect = 8.4
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 77 PWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKP 232
PW +P A PP T AP +PA P AR +A PA + V + P
Sbjct: 2 PW----IPTAPAPPVTPAPAPAPANAKSANAPPARKAA--APAALSAVPSVP 47
>BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>BC071848-1|AAH71848.1| 343|Homo sapiens RTN4 protein protein.
Length = 343
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 56 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 112
>BC068991-1|AAH68991.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>BC026788-1|AAH26788.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>BC016165-1|AAH16165.1| 392|Homo sapiens reticulon 4 protein.
Length = 392
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>BC012619-1|AAH12619.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>BC010737-1|AAH10737.1| 373|Homo sapiens reticulon 4 protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AY102285-3|AAM64241.1| 373|Homo sapiens RTN4 protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AY102285-2|AAM64242.1| 392|Homo sapiens RTN4 protein.
Length = 392
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AY102278-1|AAM64247.1| 392|Homo sapiens RTN4 isoform B2 protein.
Length = 392
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AY102277-1|AAM64246.1| 373|Homo sapiens RTN4 isoform B1 protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AJ251384-1|CAB99249.1| 373|Homo sapiens Nogo-B protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AF148538-1|AAG12177.1| 373|Homo sapiens reticulon 4b protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AF132047-1|AAD31021.1| 373|Homo sapiens foocen-m protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AC093165-1|AAY24029.1| 185|Homo sapiens unknown protein.
Length = 185
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AB040463-1|BAB18928.1| 373|Homo sapiens RTN-xS protein.
Length = 373
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 86 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 142
>AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein.
Length = 1233
Score = 29.9 bits (64), Expect = 8.4
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +2
Query: 2 IPPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
+PPA GP + P +R + P V A P P A SP+KLP EP AR
Sbjct: 127 VPPAPRGPLPAAPPVAPER-QPSWDPSPVSSTVPA--PSPLSAAAVSPSKLPEDDEPPAR 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,976,371
Number of Sequences: 237096
Number of extensions: 2621057
Number of successful extensions: 8084
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 7116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8035
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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