Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32151
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 31 0.96
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 29 2.9
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 29 2.9
Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical p... 29 3.9
Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical p... 29 3.9
AC024796-1|ABB88219.1| 210|Caenorhabditis elegans Hypothetical ... 29 3.9
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 29 3.9
Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical p... 28 5.1
Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical pr... 28 5.1
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF003384-2|AAL08040.1| 428|Caenorhabditis elegans Acyltransfera... 28 6.8
AF003384-1|AAK71374.2| 415|Caenorhabditis elegans Acyltransfera... 28 6.8
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 30.7 bits (66), Expect = 0.96
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +2
Query: 98 PEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKP 232
PEA P P AP +PA P A +A PA VP V P
Sbjct: 495 PEAA-PAPEPAPAPAPAPAPEAAPAAAPDAAPAEPAPVPEVAPAP 538
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +2
Query: 5 PPAGF-GPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
PP G P S + A+ P + P + P + APGG P P+ P
Sbjct: 143 PPGGLPAPSASATAAVAAAVASFPSP-DTSIRPGGQITPGSQAPGGGPTPAPNVPFPNGS 201
Query: 182 XSAHRGPA--QVPGVLAKP 232
+ GPA Q P + P
Sbjct: 202 SQMNGGPAMGQPPPQMGAP 220
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Frame = +2
Query: 5 PPAGF-GPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTAR 181
PP G P S + A+ P + P + P + APGG P P+ P
Sbjct: 140 PPGGLPAPSASATAAVAAAVASFPSP-DTSIRPGGQITPGSQAPGGGPTPAPNVPFPNGS 198
Query: 182 XSAHRGPA--QVPGVLAKP 232
+ GPA Q P + P
Sbjct: 199 SQMNGGPAMGQPPPQMGAP 217
>Z66521-18|CAO82066.1| 134|Caenorhabditis elegans Hypothetical
protein W02B12.15b protein.
Length = 134
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 136 WKSSKTPPQDGTHGTQXCASGARPGP 213
WKS K P DG+HG +G GP
Sbjct: 101 WKSEKWPYCDGSHGKHNKETGDNVGP 126
>Z66521-17|CAI46628.1| 103|Caenorhabditis elegans Hypothetical
protein W02B12.15a protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 136 WKSSKTPPQDGTHGTQXCASGARPGP 213
WKS K P DG+HG +G GP
Sbjct: 70 WKSEKWPYCDGSHGKHNKETGDNVGP 95
>AC024796-1|ABB88219.1| 210|Caenorhabditis elegans Hypothetical
protein Y48G1C.12 protein.
Length = 210
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 135 VEVQQNSPTGRNPRHAXVRIGGPPRSRESWRN 230
V+V QN GR+ VR+ GP RSR S N
Sbjct: 141 VQVIQNHQNGRDTHIRHVRVLGPQRSRVSTTN 172
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 136 WKSSKTPPQDGTHGTQXCASGARPGP 213
WKS K P DG+HG +G GP
Sbjct: 101 WKSEKWPYCDGSHGKHNKETGDNVGP 126
>Z82266-13|CAB05187.1| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.12 protein.
Length = 1080
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 145 SKTPPQDGTHGTQXCASGARPGPGSLGETCDYKIIIVFDNRTISVRVQT 291
++ PP GT T S A PG GS + + T SV V T
Sbjct: 1021 NQAPPSTGTTQTSGTGSTASPGTGSTSQPVTATTVQATTKSTTSVTVLT 1069
>Z68295-2|CAA92588.1| 1080|Caenorhabditis elegans Hypothetical protein
F23B2.12 protein.
Length = 1080
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 145 SKTPPQDGTHGTQXCASGARPGPGSLGETCDYKIIIVFDNRTISVRVQT 291
++ PP GT T S A PG GS + + T SV V T
Sbjct: 1021 NQAPPSTGTTQTSGTGSTASPGTGSTSQPVTATTVQATTKSTTSVTVLT 1069
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 113 PPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVP 214
PPP+D P P PH+ P SA P Q P
Sbjct: 92 PPPSDPPPPPPPVAPHQPPPQLATSAQ--PPQPP 123
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 6.8
Identities = 24/76 (31%), Positives = 27/76 (35%)
Frame = +2
Query: 5 PPAGFGPRRSISPAITQRGEKERYPWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARX 184
PP GP + A T + P G PE P P PG + P PTA
Sbjct: 192 PPGPAGPAGNDGAAGTPGPDG---PAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAP 248
Query: 185 SAHRGPAQVPGVLAKP 232
A GP PG P
Sbjct: 249 GA-AGPPGPPGPAGAP 263
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 193 SGARPGPGSLGETCDYKIII 252
SGA+ PGSLG+ C++ II+
Sbjct: 180 SGAKWWPGSLGKFCNFAIIV 199
>AF003384-2|AAL08040.1| 428|Caenorhabditis elegans
Acyltransferase-like protein 14,isoform b protein.
Length = 428
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -1
Query: 300 KIISLYAYTYGSIVKDY--YNFIITGFAK 220
KII +Y + +GS Y Y+++IT AK
Sbjct: 392 KIIGMYGFWFGSFYAQYNVYSYLITSIAK 420
>AF003384-1|AAK71374.2| 415|Caenorhabditis elegans
Acyltransferase-like protein 14,isoform a protein.
Length = 415
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -1
Query: 300 KIISLYAYTYGSIVKDY--YNFIITGFAK 220
KII +Y + +GS Y Y+++IT AK
Sbjct: 379 KIIGMYGFWFGSFYAQYNVYSYLITSIAK 407
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +2
Query: 77 PWGV*LLPEARYPPPTDAPGGSPAKLPHRTEPTARXSAHRGPAQVPGVLAKP 232
P G PE P P PG + P PTA A GP PG P
Sbjct: 212 PAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGA-AGPPGPPGPAGAP 262
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,077,234
Number of Sequences: 27780
Number of extensions: 365623
Number of successful extensions: 920
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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