Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32151
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   0.85 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   1.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   4.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   4.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   7.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 216 PGTWAGPRCALLRAVGSVLWGSFAGLPP 133
           P  W  PR   L  +G + WG+  G  P
Sbjct: 352 PVLWQNPRTKRLVNIGIISWGAECGKYP 379


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 63  RRSDTPGEYDCSQRPVIRHLRTRPVEVQQNSP 158
           R++D  G+Y     PV+++  TR +    N+P
Sbjct: 437 RKADPNGDYIRRYLPVLKNFPTRYIHEPWNAP 468


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 52  TTRREGAIPLGSMTAPRGPLSAT 120
           T +REG  P G+ T P   ++ T
Sbjct: 406 TQKREGGPPTGATTGPNEIVTCT 428


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 52  TTRREGAIPLGSMTAPRGPLSAT 120
           T +REG  P G+ T P   ++ T
Sbjct: 426 TQKREGGPPTGATTGPNEIVTCT 448


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 52  TTRREGAIPLGSMTAPRGPLSAT 120
           T +REG  P G+ T P   ++ T
Sbjct: 375 TQKREGGPPTGATTGPNEIVTCT 397


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = -3

Query: 169  FRPVGEFCWT----STGRVRRWRITGLWEQS 89
            +RP+ EF WT    S    RR+ +T L   S
Sbjct: 1536 YRPINEFHWTLVSNSVKMQRRFVVTNLQPSS 1566


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = -3

Query: 169  FRPVGEFCWT----STGRVRRWRITGLWEQS 89
            +RP+ EF WT    S    RR+ +T L   S
Sbjct: 1532 YRPINEFHWTLVSNSVKMQRRFVVTNLQPSS 1562


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 153 SPTGRNPRHAXVRIGGPPRSR 215
           SPTG +P+H+       P +R
Sbjct: 63  SPTGSSPQHSGSSASTSPAAR 83


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 61  SSLCYGGRD*ATWTKTSRRN 2
           ++ CY  R+ ATW    R N
Sbjct: 536 NTFCYFRRNAATWKNAVRHN 555


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,063
Number of Sequences: 438
Number of extensions: 5048
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)