Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32148
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 372 e-104
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 45 4e-05
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 34 0.094
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 31 0.88
AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical ... 28 4.7
Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.2
Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 27 8.2
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 27 8.2
AC006632-5|AAK85474.1| 202|Caenorhabditis elegans Hypothetical ... 27 8.2
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 372 bits (916), Expect = e-104
Identities = 168/206 (81%), Positives = 194/206 (94%)
Frame = +3
Query: 3 AVSPPGGDFSDPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYEKN 182
AVSPPGGDF+DPVT+ATLGIVQVFWGLDKKLAQRKHFPSINWLISYS+YMRAL++FYEKN
Sbjct: 398 AVSPPGGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKN 457
Query: 183 YPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSY 362
YPEFV LRTK KEILQEEEDLSEIVQLVGKASLAE+DK+TLEVAK++KDDFLQQN Y+ Y
Sbjct: 458 YPEFVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTLEVAKIIKDDFLQQNGYTKY 517
Query: 363 DRFCPFYKTVGMLKNIITFYDMSRHAVESTAQSDNKVTWNVIRDAMGNVLYQLSSMKFKD 542
DRFCPFYKTVGMLKN+I FYD++RHAVE+TAQSDNK+TWNVI+D+MG+++YQLS+MKFKD
Sbjct: 518 DRFCPFYKTVGMLKNMIGFYDLARHAVEATAQSDNKITWNVIKDSMGDLIYQLSAMKFKD 577
Query: 543 PVKDGEPKIKADFDQLLKDMSAAFRN 620
PV DGE KI+ D++ L + M+ AFRN
Sbjct: 578 PVADGEAKIRKDYEDLAEAMANAFRN 603
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/114 (27%), Positives = 61/114 (53%)
Frame = +3
Query: 3 AVSPPGGDFSDPVTAATLGIVQVFWGLDKKLAQRKHFPSINWLISYSKYMRALDDFYEKN 182
A+ P D +DP A T + L + +A+ +P+++ L S S+ M + +N
Sbjct: 368 AIYVPADDLTDPAPATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDP--NVVGQN 425
Query: 183 YPEFVPLRTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQ 344
+ + + V++ILQ+ + L +I+ ++G L+E DK+T+ A+ ++ FL Q
Sbjct: 426 HYD---IARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ-RFLSQ 475
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 33.9 bits (74), Expect = 0.094
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 392 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 502
GH EHHH H G H A GH H HG
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHG 492
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +2
Query: 392 GHAEEHHHVLRHVAARG-----GVH-GAVRQQGHVERHPRRHGQRALPALLHEVQG 541
GH EHHH H G GVH G GH P HG + H G
Sbjct: 562 GHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHG 617
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +2
Query: 392 GHAEEHHHVLRHVAARG--GVHGAVRQQGHVERHPRRHGQ 505
GH EHHH H G G H H H HG+
Sbjct: 527 GHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGE 566
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 392 GHAEEHHHVLRHVAARGGVHGAVRQQGHVERHPRRHG 502
GH EHHH H HG GH P HG
Sbjct: 427 GHHGEHHHAPAH-------HGHHESHGHGHHSPAHHG 456
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 392 GHAEEHHHVLRHVAAR-GGVHGAVRQQGHVERHPRRHG 502
GH + HHH H GG HG + H E H HG
Sbjct: 44 GHVDTHHHEESHHGEHHGGHHGVQHYESHHESH--HHG 79
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.7 bits (66), Expect = 0.88
Identities = 25/83 (30%), Positives = 26/83 (31%)
Frame = +2
Query: 254 RAAGRQGVPRGN*QDHARGRQAAQRRLPATEQLFVVRSLLPVLQDGGHAEEHHHVLRHVA 433
R R G P G H G + P RS P GH H H
Sbjct: 339 RHGSRSGSPGGR---HGHGGRHGPPHCPGRHGRHGSRSHSP----RGHGHGGRHGPPHCP 391
Query: 434 ARGGVHGAVRQQGHVERHPRRHG 502
R G HG H R P RHG
Sbjct: 392 GRHGHHGPPHHHHHDGRSPSRHG 414
>AC024211-4|AAP82631.1| 487|Caenorhabditis elegans Hypothetical
protein Y76B12C.6 protein.
Length = 487
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 440 GGVHGAVRQQGHVERHPRRHGQR 508
GG+HGA +QQ V + P H Q+
Sbjct: 443 GGIHGAQQQQQAVRKRPDSHQQQ 465
>Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical
protein F08G5.6 protein.
Length = 345
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 309 VAKLLKDDFLQQNSYSSYDRFCPFYKTVGMLKNIITFYDMSRHAVESTAQSDNKVT 476
VAK + + ++ YD F+ G L+N + Y M++ ++ NKVT
Sbjct: 165 VAKERMSISIAYSGWTPYDNLYNFFLIEGDLENPLAIYRMTQFLYQNYISKGNKVT 220
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSY--DRFCPFYKTVGMLK 404
D + + + K ++ D +TL L D L +SYSS+ D FY V +LK
Sbjct: 320 DYGDAISVGKKTPISPPDGVTLPFLSLEAHDLLVTSSYSSFQQDLESWFYVIVDLLK 376
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 DLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQNSYSSY--DRFCPFYKTVGMLK 404
D + + + K ++ D +TL L D L +SYSS+ D FY V +LK
Sbjct: 320 DYGDAISVGKKTPISPPDGVTLPFLSLEAHDLLVTSSYSSFQQDLESWFYVIVDLLK 376
>AL032657-8|CAB63370.1| 389|Caenorhabditis elegans Hypothetical
protein Y47H9C.8 protein.
Length = 389
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Frame = +3
Query: 204 RTKVKEILQEEEDLSEIVQLVGKASLAETDKITLEVAKLLKDDFLQQ--NSYSSYDRFCP 377
+ ++ L+E+ + S I L + L + + EV +++ D +++ + +
Sbjct: 25 QNSIRAALEEKLERSPIEDL--ELQLEQPEINVEEVGRIIADGIIEKTLDDEKLKELTLK 82
Query: 378 FYKTVGMLKNIITFYDMSRHAVESTAQS-----DNKVTWNVIRDAMGNVLYQLSSMKFK 539
F K V + NI + +++S T S N WN+++ +M ++ + + KFK
Sbjct: 83 FAKNVPTMANI-SIWNLSEELSTGTIDSRLVVIGNAFLWNLLKTSMSSIREKFENYKFK 140
>Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical
protein F08H9.2 protein.
Length = 130
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 265 SARRPSRKLTRSRSRSPSCSKTTS 336
S+ R SR +RSRSRS S S++TS
Sbjct: 62 SSARQSRSRSRSRSRSRSKSRSTS 85
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 392 GHAEEHHH--VLRHVAARGGVHGAVRQQGHVERHPRRHG 502
GH + HHH H GG HG + H E H HG
Sbjct: 45 GHMDTHHHHDSHHHGGHHGGHHGG-HYESHYESH-HHHG 81
>AC006632-5|AAK85474.1| 202|Caenorhabditis elegans Hypothetical
protein F28A10.8 protein.
Length = 202
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 315 KLLKDDFLQQNSYSSYDRFCPFYKTV 392
KL+KDD ++N + D+FCP + V
Sbjct: 144 KLIKDDIPRENGKWNDDQFCPLGQVV 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,033,968
Number of Sequences: 27780
Number of extensions: 208263
Number of successful extensions: 1014
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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