Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32147
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical pr... 40 0.002
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 34 0.10
Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical p... 32 0.31
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 32 0.31
Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical p... 32 0.31
Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical p... 32 0.31
X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein. 32 0.31
AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical ... 32 0.31
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.31
AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical ... 32 0.31
AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical ... 32 0.31
U70856-2|AAB09164.1| 461|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical ... 29 3.8
AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical ... 29 3.8
AF016424-8|AAB65328.2| 467|Caenorhabditis elegans Hypothetical ... 28 5.1
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 28 6.7
AF098995-11|AAC67488.2| 415|Caenorhabditis elegans Hypothetical... 28 6.7
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical
protein C32E8.3 protein.
Length = 180
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 573 AAAAVDRLTDTSKYTGSHRQRFDETGK 653
AA RLTD +KYTG+H++RFD GK
Sbjct: 122 AAGVYSRLTDHTKYTGAHKERFDAEGK 148
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Frame = +2
Query: 344 DKWMKQAKVIDGKKITTTDTAIHFKKL--KSVKLGIDDYQKFL----DDLAKNKKV---- 493
DKW+K A V+D K IT T T I F K+ K D+ +K L +D A+ K
Sbjct: 38 DKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKKATFDETKKVLAFVAEDRARQSKKPIQD 97
Query: 494 ELDEIKKKLTTCGQP 538
ELD I +KL P
Sbjct: 98 ELDAITEKLAKLEAP 112
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +3
Query: 228 MERPVRARIAPYLSRKPSRRFPNLE----IPSPMEKPSRSR 338
+ERPV AR APY+ P+R P +E P P +P R+R
Sbjct: 210 IERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQPPRTR 250
Score = 33.1 bits (72), Expect = 0.18
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 228 MERPVRARIAPYLSR-KPSRRFPNLE-----IPSPMEKPSRSRKATNG*SKPKSLMERK* 389
+ERPV AR APY+ R +P+R P +E P+P +P+ +R A R
Sbjct: 186 IERPVPARPAPYIERPEPARPAPYIERPVPARPAPYIEPTPARPAPYIEPSTAKPQPRPQ 245
Query: 390 QQRTRPF 410
RTRP+
Sbjct: 246 PPRTRPY 252
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 228 MERPVRARIAPYLSRK-PSRRFPNLEIPSP 314
+ERPV AR PY+ R P+R P +E P P
Sbjct: 174 IERPVPARPTPYIERPVPARPAPYIERPEP 203
>Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 422 PPAHTVINIELDSADTNFRSPSR 444
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 383 PPAHTVINIELDSADTNFRSPSR 405
>Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 396 PPAHTVINIELDSADTNFRSPSR 418
>Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 398 PPAHTVINIELDSADTNFRSPSR 420
>X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein.
Length = 438
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 398 PPAHTVINIELDSADTNFRSPSR 420
>AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 422 PPAHTVINIELDSADTNFRSPSR 444
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 383 PPAHTVINIELDSADTNFRSPSR 405
>AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 396 PPAHTVINIELDSADTNFRSPSR 418
>AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/83 (20%), Positives = 35/83 (42%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTTCG 532
++ I + I DT H+K + V++ +Y +D + + E+ K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 533 QPGNYITRYKITGSRSGRRSIDR 601
P + + ++ + + RS R
Sbjct: 398 PPAHTVINIELDSADTNFRSPSR 420
>U70856-2|AAB09164.1| 461|Caenorhabditis elegans Hypothetical
protein F57F4.1 protein.
Length = 461
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 295 FGKRLEGFLER*GAILALTGRSIGCSRRVPVLKLDVLDF 179
+GK GFL R LA T + C RV V +D ++F
Sbjct: 321 YGKIFGGFLMRKALELAYTNAKLYCKGRVAVRSMDHIEF 359
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = +2
Query: 302 DPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAK 481
D + A + + ++KQ + + +I F K+ K +DY+K + + K
Sbjct: 418 DDEEKSTAKLVKNIEGFLKQVTLRFPRSCKLYKISIQFTKISIFKFSANDYEKHITNAKK 477
Query: 482 NKKVELDEIKK 514
KK I+K
Sbjct: 478 EKKENEPNIRK 488
>AF016682-9|AAB66189.3| 441|Caenorhabditis elegans Hypothetical
protein T07D3.9a protein.
Length = 441
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = -2
Query: 295 FGKRLEGFLER*GAILALTGRSIGCSRRVPVLKLDVLDF-----LCHLLH 161
+GK GFL R LA T + C RV + +D ++F + H+LH
Sbjct: 301 YGKIFGGFLMRKALELAHTNAKLYCKGRVAIRSMDQIEFQKPVEIGHVLH 350
>AF016682-8|AAO38605.1| 422|Caenorhabditis elegans Hypothetical
protein T07D3.9b protein.
Length = 422
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
Frame = -2
Query: 295 FGKRLEGFLER*GAILALTGRSIGCSRRVPVLKLDVLDF-----LCHLLH 161
+GK GFL R LA T + C RV + +D ++F + H+LH
Sbjct: 256 YGKIFGGFLMRKALELAHTNAKLYCKGRVAIRSMDQIEFQKPVEIGHVLH 305
>AF016424-8|AAB65328.2| 467|Caenorhabditis elegans Hypothetical
protein F39G3.2 protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 240 VRARIAPYLSRKPSRRFPNLEIPS 311
+R R P R P+R FPNL++PS
Sbjct: 223 LRLRPWPSFGRLPTRLFPNLKLPS 246
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKL 520
+K+ K + G++ + D +H +KL S+ D+Q+ + DL++++ V I KK+
Sbjct: 460 LKELKAVYGQEEDSLD--LH-EKLLSLPFDQYDWQEMIKDLSRHRSVVYQLINKKM 512
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +2
Query: 353 MKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKL 520
+K+ K + G++ + D +H +KL S+ D+Q+ + DL++++ V I KK+
Sbjct: 460 LKELKAVYGQEEDSLD--LH-EKLLSLPFDQYDWQEMIKDLSRHRSVVYQLINKKM 512
>AF098995-11|AAC67488.2| 415|Caenorhabditis elegans Hypothetical
protein F58E1.11 protein.
Length = 415
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 347 KWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVELDEIKKKLTT 526
KW++ DGK+I T T FK++KS K+ +DD ++ K K V ++E LT+
Sbjct: 330 KWLR-----DGKQIGTVFTLSSFKEIKS-KILLDDVKRRF----KEKIVRVEESNGDLTS 379
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.5 bits (58), Expect = 8.9
Identities = 29/116 (25%), Positives = 46/116 (39%)
Frame = +2
Query: 149 TDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPKSDGKAI 328
T AVE+ T+EV + E AP A+ SS+ K K +
Sbjct: 308 TTKAVEEATEEVTEEATEATEAPVATTKESSEMH------VNTIRNMIRSASEKDLSKYV 361
Query: 329 TLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVE 496
TL K+ + ++ + KK+T T K KL D + L + K+ ++E
Sbjct: 362 TLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKLK-DLINEALSEKEKSGEIE 416
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.5 bits (58), Expect = 8.9
Identities = 29/116 (25%), Positives = 46/116 (39%)
Frame = +2
Query: 149 TDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDXXXXXXXXXXXXXXXGDPKSDGKAI 328
T AVE+ T+EV + E AP A+ SS+ K K +
Sbjct: 308 TTKAVEEATEEVTEEATEATEAPVATTKESSEMH------VNTIRNMIRSASEKDLSKYV 361
Query: 329 TLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGIDDYQKFLDDLAKNKKVE 496
TL K+ + ++ + KK+T T K KL D + L + K+ ++E
Sbjct: 362 TLISEGKFSELFELAEQKKLTLTSKFDEKLSSKMAKLK-DLINEALSEKEKSGEIE 416
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,840,861
Number of Sequences: 27780
Number of extensions: 310336
Number of successful extensions: 1117
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -