Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32146
(566 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.70
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 25 0.70
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 4.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 6.5
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.5
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.5
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.6
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 24.6 bits (51), Expect = 0.70
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 45 RYGESDPRESNSF*LLKNALRRKSARQGKRKAKRLKQAKEEAQD 176
RY S RE NS+ KN + R+ ++ R K+ +E +++
Sbjct: 38 RYSRSREREQNSY---KNEKEYRKYRERSKERSRDKRERERSKE 78
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 24.6 bits (51), Expect = 0.70
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 45 RYGESDPRESNSF*LLKNALRRKSARQGKRKAKRLKQAKEEAQD 176
RY S RE NS+ KN + R+ ++ R K+ +E +++
Sbjct: 38 RYSRSREREQNSY---KNEKEYRKYRERSKERSRDKRERERSKE 78
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -3
Query: 246 WYPCAWLQIL*TAFHAPVC 190
+YPC W +I T +C
Sbjct: 485 YYPCCWWKICWTITTPAIC 503
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -3
Query: 246 WYPCAWLQIL*TAFHAPVC 190
+YPC W +I T +C
Sbjct: 538 YYPCCWWKICWTITTPAIC 556
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 336 IKDVLNLVYDIKPELHINYRLN*AKLL 416
I ++ +YDI PE+ + L AK+L
Sbjct: 566 IDNIKKEIYDILPEVDVEEILGEAKVL 592
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/27 (25%), Positives = 18/27 (66%)
Frame = +2
Query: 92 EKRAAEKVSEAREAKSETPKAGQGGGS 172
EK+ +++ E +E+K++ + + GG+
Sbjct: 212 EKKKEDEIDEGKESKTKLSQWRKDGGT 238
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 45 RYGESDPRESNSF*LLKNALRRKSARQGKRKAKRLKQAKEEAQD 176
RY S RE NS+ KN + R+ + R + +E +++
Sbjct: 260 RYSRSREREQNSY---KNEREYRKYRETSKGRSRDRTERERSKE 300
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 45 RYGESDPRESNSF*LLKNALRRKSARQGKRKAKRLKQAKEEAQD 176
RY S RE NS+ KN + R+ + R + +E +++
Sbjct: 271 RYSRSREREQNSY---KNEREYRKYRETSKGRSRDRTERERSKE 311
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 135 PDMYRLRPPPNPRFGP 150
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 135 PDMYRLRPPPNPRFGP 150
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 135 PDMYRLRPPPNPRFGP 150
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 135 PDMYRLRPPPNPRFGP 150
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 135 PDMYRLRPPPNPRFGP 150
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 135 PDMYRLRPPPNPRFGP 150
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 135 PDMYRLRPPPNPRFGP 150
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 384 PDMYRLRPPPNPRFGP 399
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 384 PDMYRLRPPPNPRFGP 399
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 384 PDMYRLRPPPNPRFGP 399
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 384 PDMYRLRPPPNPRFGP 399
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 384 PDMYRLRPPPNPRFGP 399
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 384 PDMYRLRPPPNPRFGP 399
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 383 PDMYRLRPPPNPRFGP 398
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 368 PDMYRLRPPPNPRFGP 383
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 357 PDSRRL*XPPXSVFGP 310
PD RL PP FGP
Sbjct: 384 PDMYRLRPPPNPRFGP 399
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,702
Number of Sequences: 438
Number of extensions: 2093
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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