Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32145
         (622 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70753-12|CAA94761.2|  585|Caenorhabditis elegans Hypothetical p...    30   1.5  
Z46935-6|CAL36509.1|  128|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AC024090-1|AAF35424.2|  591|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z75549-5|CAA99918.1|  364|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z81583-5|CAB04673.1|  574|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U42830-2|AAC48274.1|  243|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AL117195-5|CAB55012.1|  732|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z70753-12|CAA94761.2|  585|Caenorhabditis elegans Hypothetical
           protein F40F9.5 protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 19/66 (28%), Positives = 36/66 (54%)
 Frame = +3

Query: 312 EENVQRLIASVQVWKNVVQTAIPVCVILFVGAWSDKTGKRKACILLPDSW*IFILFGFHR 491
           +++V++ IA+ +++  ++ T   + V   +G WSD+ G RK+ +L       F LFG   
Sbjct: 118 QDDVEKDIANTKIYLQIMGTIPTLIVSPLIGNWSDRNG-RKSPLL-------FSLFGLFI 169

Query: 492 KHIFLL 509
            +  LL
Sbjct: 170 NNFILL 175


>Z46935-6|CAL36509.1|  128|Caenorhabditis elegans Hypothetical
           protein M106.7 protein.
          Length = 128

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 27/108 (25%), Positives = 46/108 (42%)
 Frame = +3

Query: 21  LKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDNTTVEPIMACYVMPSVLAS 200
           L     EE +K  HE C   S  + E KK  +      +  N  V     C ++P  LA 
Sbjct: 20  LNALKKEEDNKQQHERCKQLSTVIYETKK--YLNTSPAVTQNEAV----ICELIPK-LAP 72

Query: 201 LAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLIASV 344
             +      +   +NL  S      L + +TE    +EE++++L+++V
Sbjct: 73  FKLTGAETLQV--INLRPSTTADIQLLIEETEERFPSEEDLEKLVSTV 118


>AC024090-1|AAF35424.2|  591|Caenorhabditis elegans Hypothetical
           protein C52E2.5 protein.
          Length = 591

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/70 (20%), Positives = 34/70 (48%)
 Frame = +3

Query: 183 PSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLIASVQVWKNV 362
           P  + ++A++ +S  +AC  +++ S  V       +   ++  +      +AS++ W+N 
Sbjct: 490 PVAIKTIALRTMSFLEACLQSVDVSRSVLPYSNSTKLNKFSVPDVQSINDLASLEQWRNA 549

Query: 363 VQTAIPVCVI 392
            +  I  CV+
Sbjct: 550 NELEIENCVV 559


>Z75549-5|CAA99918.1|  364|Caenorhabditis elegans Hypothetical
           protein T19C4.5 protein.
          Length = 364

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 113 CKLFYFANVF*FQRACFVRSFRALFIVTNFQV 18
           C + +F N+F     C+VRS    F+++N  +
Sbjct: 8   CLVLFFGNIFGSSENCYVRSSIFNFLISNLSI 39


>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical protein
            F18C5.3 protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 3    TMAVKDLKVCDDEECSKGSHETCPLKSENVRE 98
            ++ V++LK   DEE SK + E C L  + + E
Sbjct: 1379 SLLVRELKTSSDEELSKLTQEVCGLVKKKIGE 1410


>Z81583-5|CAB04673.1|  574|Caenorhabditis elegans Hypothetical
           protein T02G6.5 protein.
          Length = 574

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +3

Query: 12  VKDLKVCDDEECSKGSHETCPLKSENV-REIKKLTFKQRLKLIKDN-TTVEPIMACYVMP 185
           V  + +CD  + S+ S  TC LK++ V R+I KL      KL  +N  T +P+   YV+ 
Sbjct: 248 VLQMDICDMLQLSRTSSNTC-LKTKKVNRKIYKLMISDP-KLHDNNLITEDPLRQVYVIE 305

Query: 186 S 188
           S
Sbjct: 306 S 306


>U42830-2|AAC48274.1|  243|Caenorhabditis elegans Hypothetical
           protein C53B7.3 protein.
          Length = 243

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +2

Query: 263 GLHGFNITTNGKLHGGGRKRTKTDSECPSLEKRCANGY 376
           G  G+N   +G  +G    R   +S+C S  + C++GY
Sbjct: 195 GSSGYNTYGSGNTYGSSNSRCTYNSDCGS-NRYCSSGY 231


>AL117195-5|CAB55012.1|  732|Caenorhabditis elegans Hypothetical
           protein Y57A10A.7 protein.
          Length = 732

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 389 HTYWYSRLH-NVFPNLDTRYQSLYVFFRLRVVFRLS 285
           H Y+Y R H ++ PN+  ++ +  V  R+R++F LS
Sbjct: 42  HIYYYIRFHEHIAPNI-AKWDNFNVTTRIRMMFALS 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,564
Number of Sequences: 27780
Number of extensions: 325881
Number of successful extensions: 953
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)