Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32135
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical ...   161   5e-40
AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical ...    61   6e-10
AL132949-37|CAB70100.3|  285|Caenorhabditis elegans Hypothetical...    39   0.004
AL132949-4|CAB70101.2|  439|Caenorhabditis elegans Hypothetical ...    39   0.004
AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical ...    36   0.019
U51999-6|AAV28361.1|  380|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U53147-3|AAM29659.1|  550|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical pr...    28   6.8  

>AC025721-9|AAK29904.3|  639|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.5 protein.
          Length = 639

 Score =  161 bits (390), Expect = 5e-40
 Identities = 90/218 (41%), Positives = 126/218 (57%), Gaps = 1/218 (0%)
 Frame = +3

Query: 9   LKYNLPTAFRITGSKGEADALMKIVNSDYFSQLLNXXXXXXXXXXXXXXXPVNLPWYPGG 188
           L+ +LP +FR  G   + + L+  + + +F +++                P +LPWY   
Sbjct: 67  LQRDLPVSFRFQGCHKDREQLIHEMENRFFGKIMEAGDTAVCV-------PKSLPWYKE- 118

Query: 189 FAWQLRLTRMDIRRNEALYRLHNFLVAETAAGGVSRQEQVSMIPPVVLDVKPHHKVLDMC 368
            A+Q  ++R  +R +  L +LHNFLV E   G +SRQE VSMIPP++L     H VLD+C
Sbjct: 119 -AYQTPMSRTAVRSHPILAQLHNFLVTEAELGNLSRQEAVSMIPPLLLAPTSEHFVLDLC 177

Query: 369 AAPGSKTAQLIEFLHADEDKMPTGFVMANDVDNSRCYMLVHQA-KRLNSPCIVITNHDSA 545
           AAPGSKT QL+E +H +E+  P G V+ANDVD  RCYML+H   KR  +    +T  D+A
Sbjct: 178 AAPGSKTTQLLEMIHENEEN-PKGMVIANDVDMKRCYMLIHHTLKRFRTAACAVTCEDAA 236

Query: 546 FMPSIEVTDEQDPSKTKPLKFDRILCDVPCSGDATLRK 659
             P I  +D         ++FDR+L DV CSGD TLRK
Sbjct: 237 RFPHISDSD------GGLIQFDRVLADVICSGDGTLRK 268


>AF106576-1|AAC78177.2|  664|Caenorhabditis elegans Hypothetical
           protein W07E6.1 protein.
          Length = 664

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 42/130 (32%), Positives = 62/130 (47%)
 Frame = +3

Query: 270 ETAAGGVSRQEQVSMIPPVVLDVKPHHKVLDMCAAPGSKTAQLIEFLHADEDKMPTGFVM 449
           E  AG    Q   S++P + L  +P  +VLDMC+APG KT+ +   +        +G + 
Sbjct: 281 EYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALM------KNSGVLF 334

Query: 450 ANDVDNSRCYMLVHQAKRLNSPCIVITNHDSAFMPSIEVTDEQDPSKTKPLKFDRILCDV 629
           AND + +RC  ++    RL     V+ N              ++ SK +P  FDRIL D 
Sbjct: 335 ANDANFTRCRAIIGNLHRLGVNNTVVCN-----------LGGEEFSKIRPNGFDRILLDA 383

Query: 630 PCSGDATLRK 659
           PCSG   + K
Sbjct: 384 PCSGTGVIWK 393


>AL132949-37|CAB70100.3|  285|Caenorhabditis elegans Hypothetical
           protein Y53F4B.4a protein.
          Length = 285

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 36/121 (29%), Positives = 55/121 (45%)
 Frame = +3

Query: 297 QEQVSMIPPVVLDVKPHHKVLDMCAAPGSKTAQLIEFLHADEDKMPTGFVMANDVDNSRC 476
           Q++ S +P  +L+ +P  +V D CAAPG KT+      HA       G V A D    R 
Sbjct: 65  QDKASCLPAFLLNPRPGSQVFDTCAAPGMKTS------HAAAIMENQGKVWAMDRAADR- 117

Query: 477 YMLVHQAKRLNSPCIVITNHDSAFMPSIEVTDEQDPSKTKPLKFDRILCDVPCSGDATLR 656
             +    + L++  + I    S+F      TD  D  K   +KF   + D PCSG   ++
Sbjct: 118 --VATMKQLLDASKVAIA---SSFCGDFLKTDVTD-KKFSKVKF--AIVDPPCSGSGIVK 169

Query: 657 K 659
           +
Sbjct: 170 R 170


>AL132949-4|CAB70101.2|  439|Caenorhabditis elegans Hypothetical
           protein Y53F4B.4b protein.
          Length = 439

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 36/121 (29%), Positives = 55/121 (45%)
 Frame = +3

Query: 297 QEQVSMIPPVVLDVKPHHKVLDMCAAPGSKTAQLIEFLHADEDKMPTGFVMANDVDNSRC 476
           Q++ S +P  +L+ +P  +V D CAAPG KT+      HA       G V A D    R 
Sbjct: 219 QDKASCLPAFLLNPRPGSQVFDTCAAPGMKTS------HAAAIMENQGKVWAMDRAADR- 271

Query: 477 YMLVHQAKRLNSPCIVITNHDSAFMPSIEVTDEQDPSKTKPLKFDRILCDVPCSGDATLR 656
             +    + L++  + I    S+F      TD  D  K   +KF   + D PCSG   ++
Sbjct: 272 --VATMKQLLDASKVAIA---SSFCGDFLKTDVTD-KKFSKVKF--AIVDPPCSGSGIVK 323

Query: 657 K 659
           +
Sbjct: 324 R 324


>AC025716-7|AAK95888.1|  465|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.21 protein.
          Length = 465

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
 Frame = +3

Query: 309 SMIPPVVLDVKPHHKVLDMCAAPGSKTAQLIEFLHADEDKMPTGFVMANDVDNSRCYMLV 488
           S++P + L ++    +LDMCAAPG K+      L A    +P+  ++ ND   +R    +
Sbjct: 241 SLLPVLALGLQKDDSLLDMCAAPGGKS------LLAALSNLPSK-IVCNDFKLAR----L 289

Query: 489 HQAKRLNSPCIVITNHDSAFMPSIEVTDEQDPSKTKPL----KFDRILCDVPCSGD 644
            Q KR     +     DS  +    V   +D S  K       +D++L DVPCS D
Sbjct: 290 GQLKR---ALMTYVPEDSETIDKF-VLKRKDASDVKTWDEFEAYDKVLVDVPCSTD 341


>U51999-6|AAV28361.1|  380|Caenorhabditis elegans Hypothetical
           protein C43H6.1 protein.
          Length = 380

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 19/56 (33%), Positives = 27/56 (48%)
 Frame = +3

Query: 417 DEDKMPTGFVMANDVDNSRCYMLVHQAKRLNSPCIVITNHDSAFMPSIEVTDEQDP 584
           DE  M      AN + N    M VH+A R  S  +   NH + ++  I +TD+Q P
Sbjct: 270 DEKAMNIYAEEANKLSNGTNAMTVHKAMR--SIFLGSNNHANEYIARIPITDDQTP 323


>U53147-3|AAM29659.1|  550|Caenorhabditis elegans Hypothetical
           protein C01B7.1b protein.
          Length = 550

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +3

Query: 363 MCAAPGSKTAQLIEFLHADEDKMPTGFVMANDVD-NSRCYMLVHQAKRLN-SPCIVITNH 536
           MC    +  AQ+ E LH+   K  + F+  ++V    R  +L+  A  LN S  +   NH
Sbjct: 126 MCLVERASDAQMREHLHSSHQKNMSKFIYVDNVKAKRRLQILMDSAFSLNVSERVNAKNH 185

Query: 537 DSA 545
            S+
Sbjct: 186 PSS 188


>U53147-2|AAA96114.2|  935|Caenorhabditis elegans Hypothetical
           protein C01B7.1a protein.
          Length = 935

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +3

Query: 363 MCAAPGSKTAQLIEFLHADEDKMPTGFVMANDVD-NSRCYMLVHQAKRLN-SPCIVITNH 536
           MC    +  AQ+ E LH+   K  + F+  ++V    R  +L+  A  LN S  +   NH
Sbjct: 126 MCLVERASDAQMREHLHSSHQKNMSKFIYVDNVKAKRRLQILMDSAFSLNVSERVNAKNH 185

Query: 537 DSA 545
            S+
Sbjct: 186 PSS 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,402,813
Number of Sequences: 27780
Number of extensions: 288388
Number of successful extensions: 627
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)