Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32134
(417 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 125 2e-29
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 119 1e-27
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 113 4e-26
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 113 7e-26
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 59 1e-09
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 28 2.6
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 2.6
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 3.5
08_01_0355 - 3122374-3122520,3122912-3123047,3123124-3123221,312... 27 4.6
03_02_0389 - 8036575-8036841,8037011-8037133,8037516-8037736,803... 27 4.6
04_03_0118 - 11474060-11475298 27 6.0
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 27 6.0
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 27 6.0
07_03_0337 + 16918613-16919078,16921610-16921725,16922039-169222... 27 8.0
06_03_0066 - 16145398-16145475,16145638-16145700,16146432-161465... 27 8.0
01_01_0733 - 5715719-5715785,5715908-5715966,5717844-5717884,571... 27 8.0
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 125 bits (301), Expect = 2e-29
Identities = 60/111 (54%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
Frame = +3
Query: 87 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 260
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 261 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPY 413
S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPY 138
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 119 bits (286), Expect = 1e-27
Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Frame = +3
Query: 87 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 260
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 261 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPY 413
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPY 136
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 113 bits (273), Expect = 4e-26
Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Frame = +3
Query: 78 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 251
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 252 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPY 413
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPY 136
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 113 bits (271), Expect = 7e-26
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 12/121 (9%)
Frame = +3
Query: 87 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 230
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 231 TSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETP 410
TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETP
Sbjct: 85 TSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETP 144
Query: 411 Y 413
Y
Sbjct: 145 Y 145
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 59.3 bits (137), Expect = 1e-09
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 87 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 266
D F E F D+S+E WV S GK+ K K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIK 77
Query: 267 KF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPY 413
+ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPY 130
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -3
Query: 343 QSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPN 164
+S+ L+ N + G+P L GLN +++++ + P+ SSG L FP + N
Sbjct: 738 KSIGALDLSNNQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNN 796
Query: 163 SFPGCSL 143
G L
Sbjct: 797 GLCGIPL 803
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 123 TNHQETSPQRIHHNLSKIMPA-S*QRPVQQLSFSIHS 16
TNH E P+ H LSKI+ A S RP+ +S+ +H+
Sbjct: 41 TNHVERPPKERH--LSKIIAAASGARPLADVSYCVHA 75
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 121 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 35
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
>08_01_0355 -
3122374-3122520,3122912-3123047,3123124-3123221,
3123724-3123801,3123876-3123945,3124452-3124516,
3124606-3124686,3124822-3124926,3125002-3125085,
3125175-3125250,3125358-3125436,3125526-3125646,
3125768-3125827
Length = 399
Score = 27.5 bits (58), Expect = 4.6
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 168 GKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKFKPF--SNEGKPLVVQFTVKHEQDI 338
G+ + A DPE D+ LK EDA AL++K + N K ++ ++++QD+
Sbjct: 244 GRVRDWARTHSGDPEIDEALKKGEDAGL-ALAKKVYAYIHKNGYKTKLMAAAIRNKQDV 301
>03_02_0389 -
8036575-8036841,8037011-8037133,8037516-8037736,
8037788-8037812,8038344-8038445,8038556-8038951,
8039647-8039699,8039813-8039897,8040220-8040370,
8040457-8040464
Length = 476
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 180 LTAGKFFSDPEDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTV 320
L AG + + GL S ARFYA+ R + S++ VQF+V
Sbjct: 12 LVAGGYLVLERPNAGLVLSTSARFYAIVRPLRDELSHDSWAWAVQFSV 59
>04_03_0118 - 11474060-11475298
Length = 412
Score = 27.1 bits (57), Expect = 6.0
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 147 HCTPNCFPTNHQETSPQRIHH 85
HCTP+C+P H + + H
Sbjct: 313 HCTPSCYPDEHYIPTYLHLRH 333
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = -3
Query: 307 TTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQL 131
TT G P + N + L EV S S ++KN P P G + Y Q+
Sbjct: 751 TTVGFPGRIRAPNPIVKKARLVKKEVEPIFSDSDAMKNAPKTTTTCPRCQNGEAYYRQM 809
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -2
Query: 392 VLLLQFAVKDLEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPRIFR 234
V LL L ++ +T +V+ ++DS+ + Q +R G+ E ++FR
Sbjct: 603 VFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFR 655
>07_03_0337 +
16918613-16919078,16921610-16921725,16922039-16922208,
16922509-16922602,16923371-16923457,16923529-16923609,
16923800-16923925,16924541-16924649,16924723-16924802,
16925401-16925529,16925605-16925705,16926075-16926208,
16926307-16926404,16926488-16926607,16927008-16927022,
16927930-16927957,16928066-16928118,16928446-16928517,
16928605-16928652,16928928-16929033,16929110-16929168,
16929792-16929887,16929942-16929959
Length = 801
Score = 26.6 bits (56), Expect = 8.0
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +3
Query: 171 KFKLTAGKFFSDPED-DKGLKTSEDA-RFYALSRKFKPFSNEGKPL---VVQFTVKHEQD 335
K KF S+ E +K + + E++ R S K + + G L +V+ TVKHE+
Sbjct: 537 KLDSLTSKFLSEKESWEKNVASVEESWRLKCESVKAESNGHAGDELKKNLVELTVKHEKL 596
Query: 336 IDCGGGYLKVFDCKLEQKD 392
+ + + D LE+KD
Sbjct: 597 KEEHDSFRDIADRMLEEKD 615
>06_03_0066 -
16145398-16145475,16145638-16145700,16146432-16146518,
16147168-16147246,16147359-16147478,16149289-16149440
Length = 192
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 252 YALSRKFKPFSNEGKPLVVQFTVK 323
+ R+F +EG+P+VV FT+K
Sbjct: 68 FTSERQFVQLLHEGRPVVVAFTIK 91
>01_01_0733 -
5715719-5715785,5715908-5715966,5717844-5717884,
5718086-5718134,5718427-5718559,5719303-5719384,
5719990-5720472,5720612-5721024,5721260-5721419,
5721541-5721665,5721756-5721811,5721831-5721889,
5722069-5722180,5722952-5723032
Length = 639
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 258 LSRKFKPFSNEGKPLVVQFTVKHEQDI 338
LSR F SN+ K L+ +F KH D+
Sbjct: 90 LSRNFSVSSNDSKRLLQEFVNKHGADL 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,160,385
Number of Sequences: 37544
Number of extensions: 242166
Number of successful extensions: 732
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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