Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32131
(620 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 26 0.34
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 23 2.4
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 23 2.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.4
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 3.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 3.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.2
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 4.2
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 4.2
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 9.7
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 25.8 bits (54), Expect = 0.34
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -1
Query: 503 LFYRG-TYIS*QFH*VRKIVPRPSPISLM*FPVLSIANTHIRINKQTKILN*F*NSKTGR 327
+FYR ++ F + +P+ + + + FP + IA+ + N+Q ILN F
Sbjct: 400 IFYRWHAFVDDVFQEHKNTLPQYT-VQQLDFPGIEIADIKLTTNQQRNILNTFWTKSDVD 458
Query: 326 KSKPIDPILPRG 291
S+ +D PRG
Sbjct: 459 LSRGLD-FTPRG 469
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 444 WNYFP-YSMKLLGNIRTSIKE*FVP*PCSYVNLFVSQRY 557
+ YFP + + + N T+I E C Y+N++V Q+Y
Sbjct: 104 YEYFPGFPGEEMWNPNTNISE-----DCLYLNIWVPQKY 137
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 23.0 bits (47), Expect = 2.4
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 444 WNYFP-YSMKLLGNIRTSIKE*FVP*PCSYVNLFVSQRY 557
+ YFP + + + N T+I E C Y+N++V Q+Y
Sbjct: 104 YEYFPGFPGEEMWNPNTNISE-----DCLYLNIWVPQKY 137
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 204 AESTTGSETRPTEKIRRETQ 145
A TTG+ T PT ++R+ Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 394 FAIDSTGNHIKL 429
+ +DS GNH+KL
Sbjct: 341 YVVDSYGNHVKL 352
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 394 FAIDSTGNHIKL 429
+ +DS GNH+KL
Sbjct: 341 YVVDSYGNHVKL 352
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 471 VSLSKENSSTSIAYKLNVISCTVNS 397
V+L N + YK +I CTVNS
Sbjct: 299 VALGSYNKFNNNVYKDALIVCTVNS 323
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 3.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 471 VSLSKENSSTSIAYKLNVISCTVNS 397
V+L N + YK +I CTVNS
Sbjct: 352 VALGSYNKFNNNVYKDALIVCTVNS 376
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 22.2 bits (45), Expect = 4.2
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Frame = +1
Query: 58 YHKHRSPSSSNPLLATKGSTSKLTHRHSPLSFSPDLLS-----GSRFRSGGRFC 204
YH +R P N A G S L ++ LLS G + S G C
Sbjct: 24 YHPYRQPDGMNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMC 77
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 22.2 bits (45), Expect = 4.2
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 5/54 (9%)
Frame = +1
Query: 58 YHKHRSPSSSNPLLATKGSTSKLTHRHSPLSFSPDLLS-----GSRFRSGGRFC 204
YH +R P N A G S L ++ LLS G + S G C
Sbjct: 24 YHPYRQPDGMNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMC 77
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 21.0 bits (42), Expect = 9.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 465 LSKENSSTSIAYKLNVISCTVNSEYTHS 382
L+ S S Y+ +CT ++Y HS
Sbjct: 32 LNSHLKSHSNVYQYRCANCTYATKYCHS 59
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,802
Number of Sequences: 438
Number of extensions: 3454
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -