Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32129
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.7  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   5.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   6.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   9.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   9.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   9.0  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.0  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 544 SLPVFSWSYYNIINRSKLKIHHFFD 618
           SLP + + Y N+IN  ++++    D
Sbjct: 317 SLPYYKYKYLNVINALEMRLMDAID 341


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 544 SLPVFSWSYYNIINRSKLKIHHFFD 618
           SLP + + Y N+IN  ++++    D
Sbjct: 317 SLPYYKYKYLNVINALEMRLMDAID 341



 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 730 NMRNYPQILVKLKYKLQDVQKN 665
           NMR Y     KL Y ++DV+ N
Sbjct: 210 NMREYNDPEYKLDYFMEDVELN 231


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 10  WYLDSGIIGNI 42
           W LDSG+I NI
Sbjct: 140 WVLDSGLINNI 150


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 10  WYLDSGIIGNI 42
           W LDSG+I N+
Sbjct: 134 WVLDSGLINNV 144


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 10  WYLDSGIIGN 39
           W LDSGII N
Sbjct: 140 WILDSGIINN 149


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 135 MCCXNSIINLIIPQLNDPWISXIP---ARIKSLKDV 37
           +CC  SI+NL    L+  W    P   A+ ++LK V
Sbjct: 118 LCCTASILNLCAIALDRYWAITDPINYAQKRTLKRV 153


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 135 MCCXNSIINLIIPQLNDPWISXIP---ARIKSLKDV 37
           +CC  SI+NL    L+  W    P   A+ ++LK V
Sbjct: 118 LCCTASILNLCAIALDRYWAITDPINYAQKRTLKRV 153


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 135 MCCXNSIINLIIPQLNDPWISXIP---ARIKSLKDV 37
           +CC  SI+NL    L+  W    P   A+ ++LK V
Sbjct: 118 LCCTASILNLCAIALDRYWAITDPINYAQKRTLKRV 153


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +1

Query: 499 LFV*AVGITAFLLLLSLPVFSWSYYN 576
           +FV  + I  F +++  P+F ++ +N
Sbjct: 85  MFVVNLAICDFFMMIKTPIFIYNSFN 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,454
Number of Sequences: 438
Number of extensions: 3447
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)