Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32122
(581 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0953 - 7472173-7472178,7472216-7472311,7472370-7472462,747... 32 0.38
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 31 0.89
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 29 3.6
09_04_0744 - 19867604-19867686,19868075-19869872,19870777-198708... 28 4.7
02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196 28 4.7
12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 28 6.2
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 28 6.2
11_03_0063 + 9515666-9516656,9517503-9518599 28 6.2
10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565 28 6.2
10_05_0085 - 9005539-9005922,9006207-9006463,9006707-9006883,900... 28 6.2
09_04_0086 + 14445665-14446683,14448669-14448915 28 6.2
09_04_0085 + 14441123-14443507,14443731-14443787 28 6.2
08_02_0007 + 11208170-11210325,11210367-11210403 28 6.2
08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 28 6.2
08_02_0003 + 11180421-11180757,11180773-11185715 28 6.2
08_02_0002 + 11173365-11173512,11173528-11178470 28 6.2
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 28 6.2
07_01_0376 + 2815419-2815755,2815912-2817659 28 6.2
06_03_0452 + 20931484-20933872,20933950-20934074 28 6.2
06_01_0223 - 1709897-1709912,1710188-1712520 28 6.2
05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931 28 6.2
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 28 6.2
02_02_0337 - 9096588-9096603,9096879-9097927 28 6.2
01_01_0100 - 755894-756662,757086-757598,758718-761050 28 6.2
08_02_0009 + 11216532-11218687,11220727-11225998 27 8.2
08_02_0008 + 11212351-11214506,11214548-11214584 27 8.2
06_01_0681 + 4987669-4988418 27 8.2
>01_01_0953 - 7472173-7472178,7472216-7472311,7472370-7472462,
7472855-7473019,7473689-7474821,7474902-7475426,
7477077-7477249,7478737-7478831,7478893-7481688
Length = 1693
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 416 ERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEEGLHKQSQAHTDSVK 568
E RAE+ C + TD L EEL+++R +T E L K +Q + K
Sbjct: 1498 ETRAENAESKCTLLTDTNLELSEELSFLRGRVDTLENSLCKANQLKMSAAK 1548
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 30.7 bits (66), Expect = 0.89
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = +2
Query: 329 PAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYVRLD 508
P E+H YAS G I P+ R+++T V T+E P A + LD
Sbjct: 369 PRELHTSRAPGYASQGHIPTTRARSPKL--GRSKNTS---SVSTEESTVPSSRPARLSLD 423
Query: 509 ENTAEEGLHKQSQAHT 556
E ++ G+ K A+T
Sbjct: 424 ERASQNGVKKVPAANT 439
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = -3
Query: 390 IGSMDPTLAYFLPFLSCISAGILIDSTMPL*FSFSTVRLDIAVFLENKSEN 238
+G M + +F F +C G+L +S++ F T+R+D+ + + ++N
Sbjct: 524 LGMMRWGVVFFFSFSNCSICGLLYESSVKHIVFFCTIRVDLVLHTFDGNKN 574
>09_04_0744 -
19867604-19867686,19868075-19869872,19870777-19870801,
19872313-19872710
Length = 767
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 470 LAPLEELAYVRLDENTAEEGLHKQSQAHTDSVK 568
+A LE+L Y+ N ++E LHK Q TD+ K
Sbjct: 438 IAKLEKLRYLLAGVNFSKELLHKVEQPETDNRK 470
>02_02_0305 + 8786599-8787184,8788613-8790001,8790370-8791196
Length = 933
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ + ++ ++A EL Y+ L +E
Sbjct: 146 EELKRAGSNPHNFANIVSNIIIAEDPELGYITLQNERLKE 185
>12_02_0772 -
23029703-23029715,23029835-23030463,23030637-23031673,
23031830-23032166
Length = 671
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 496 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 535
>11_03_0065 -
9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 401 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 440
>11_03_0063 + 9515666-9516656,9517503-9518599
Length = 695
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 178 EELKRAGSNPHNFANVISNIIIAEDPELCYTTLQNERLKE 217
>10_06_0007 + 9510385-9510535,9510860-9511433,9511553-9511565
Length = 245
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 70 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 109
>10_05_0085 -
9005539-9005922,9006207-9006463,9006707-9006883,
9007349-9007490,9007814-9007904,9009024-9010942
Length = 989
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 468 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 507
>09_04_0086 + 14445665-14446683,14448669-14448915
Length = 421
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 178 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 217
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 606 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 645
>08_02_0007 + 11208170-11210325,11210367-11210403
Length = 730
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 593 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 632
>08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391
Length = 818
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 601 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 640
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 591 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 630
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 528 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 567
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 435 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 474
>07_01_0376 + 2815419-2815755,2815912-2817659
Length = 694
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 554 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 593
>06_03_0452 + 20931484-20933872,20933950-20934074
Length = 837
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEEGLHKQSQAHT 556
EELER S +H+ G D +A L +L V+L +N+ E L ++ H+
Sbjct: 320 EELERLFLSNNHFTGSIPDS-VALLPKLTNVQLFQNSFEGILPQELGKHS 368
>06_01_0223 - 1709897-1709912,1710188-1712520
Length = 782
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 606 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 645
>05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931
Length = 553
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 239 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 278
>04_03_0024 -
9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 606 EELKRAGSNLHNFANVISNIIIAEDPELGYTTLQNERLKE 645
>02_02_0337 - 9096588-9096603,9096879-9097927
Length = 354
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 178 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 217
>01_01_0100 - 755894-756662,757086-757598,758718-761050
Length = 1204
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 606 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLKE 645
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 593 EELKRAGSNPHNFANVVSNIIIAEDPELGYTTLQNERLKE 632
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 1307 EELKRAGSNPHNFANVVSNIIIAEDPELGYTTLQNERLKE 1346
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L +E
Sbjct: 593 EELKRAGSNPHNFANVVSNIIIAEDPELGYTTLQNERLKE 632
>06_01_0681 + 4987669-4988418
Length = 249
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 407 EELERRAESTHHYCGVFTDELLAPLEELAYVRLDENTAEE 526
EEL+R + H++ V ++ ++A EL Y L E
Sbjct: 178 EELKRAGSNPHNFANVISNIIIAEDPELGYTTLQNERLRE 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,567,999
Number of Sequences: 37544
Number of extensions: 215142
Number of successful extensions: 719
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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