Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32122
         (581 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical...    29   3.2  
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for...    29   3.2  
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for...    29   3.2  
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei...    29   3.2  
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei...    29   3.2  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AF043697-5|AAB97557.2|  230|Caenorhabditis elegans Hypothetical ...    27   9.7  
AC006730-1|AAK72090.1|  324|Caenorhabditis elegans Serpentine re...    27   9.7  

>Z81508-1|CAB04142.1|  331|Caenorhabditis elegans Hypothetical
           protein F20E11.1 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 145 KLRSRFNHLFKNLIFVSIFYISIYCILDHVVW 50
           K  + F  +F+NL +V  F++  +CI D +V+
Sbjct: 171 KRNAAFQTVFQNLTWVDFFFLMTWCINDIIVF 202


>AL023828-22|CAA19467.2|  272|Caenorhabditis elegans Hypothetical
           protein Y17G7B.19 protein.
          Length = 272

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +2

Query: 338 IHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVFTDELLAPLEELAYV 499
           + + +GK   S G     HCCP   ++   ++T ++    TD    P E L +V
Sbjct: 182 LSKSSGKCPKSNGMCHRGHCCPRLTIDEARKATPYHLNYVTDTQCDPTEPLDFV 235


>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
            protein.
          Length = 4280

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 390  YTAARPKSWSDALRARTTTAACSP 461
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
            protein.
          Length = 4450

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 390  YTAARPKSWSDALRARTTTAACSP 461
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
            805, isoform b protein.
          Length = 4450

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 390  YTAARPKSWSDALRARTTTAACSP 461
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
            805, isoform a protein.
          Length = 4280

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 390  YTAARPKSWSDALRARTTTAACSP 461
            YTA  P  WSD+L  RTT +   P
Sbjct: 3221 YTAEGPGPWSDSLEIRTTGSELGP 3244


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 372 WGPYCRYTAARPKSW 416
           W PYC Y A+RP  W
Sbjct: 475 WVPYCDYEASRPLGW 489


>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +3

Query: 330 LLKYTRETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSPT 464
           +  Y RET +    W P CR        + D  + +     C PT
Sbjct: 180 MFTYNRETLQCDEFWFPGCRTAETNANLFEDYQQCQKIADLCKPT 224


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +3

Query: 330 LLKYTRETARSTRAWGPYCRYTAARPKSWSDALRARTTTAACSPT 464
           +  Y RET +    W P CR        + D  + +     C PT
Sbjct: 178 MFTYNRETLQCDEFWFPGCRTAETNANLFEDYQQCQKIADLCKPT 222


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical protein
            F09C3.1 protein.
          Length = 1391

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
 Frame = +2

Query: 278  RTVLNENYKGIVESMSIPAEIHERNGKKYASVGSILPIHCCPPEELERRAESTHHYCGVF 457
            RT  ++NY+ IV  ++    +HER  ++       +        +L  + E  H     +
Sbjct: 1195 RTQKSDNYQSIVTDIANDIRLHERRQRERQEQKKSI---AATKRKLMEQREELHEKLARY 1251

Query: 458  TDELLAPLEELAYV--RLD--ENTAEEGLHKQSQAHTDSVK 568
             + L   L+ L+    RL    NT E G  ++ +A  D +K
Sbjct: 1252 EEYLETCLQNLSRTSRRLSFRPNTKEAGKIQKERASLDQIK 1292


>AF043697-5|AAB97557.2|  230|Caenorhabditis elegans Hypothetical
           protein F56C11.5 protein.
          Length = 230

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 109 LIFVSIFYISIYCILDHVVWQILII 35
           L+FV+IFY     ++ H+V QIL++
Sbjct: 85  LLFVAIFYQIGNLLIPHIVMQILLV 109


>AC006730-1|AAK72090.1|  324|Caenorhabditis elegans Serpentine
           receptor, class i protein33 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 107 NFRINFLY*YLLYFRSCRVANFDYRIL 27
           +F +NFL  +L+ F+S +V +F Y +L
Sbjct: 22  SFVLNFLVIFLIIFKSYKVDSFQYYLL 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,223,666
Number of Sequences: 27780
Number of extensions: 203015
Number of successful extensions: 697
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)