Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32119
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93386-5|CAB07646.1|  473|Caenorhabditis elegans Hypothetical pr...   179   1e-45
AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical ...   156   2e-38
Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z68214-5|CAA92446.2|  397|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z68214-3|CAA92445.1|  399|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z66521-11|CAA91398.2|  471|Caenorhabditis elegans Hypothetical p...    29   3.9  
AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like ...    29   3.9  
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    28   5.1  
AC006726-1|AAF60453.1|  124|Caenorhabditis elegans Hypothetical ...    28   5.1  
AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine r...    28   6.8  
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    27   8.9  
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ...    27   8.9  

>Z93386-5|CAB07646.1|  473|Caenorhabditis elegans Hypothetical
           protein R11H6.1 protein.
          Length = 473

 Score =  179 bits (436), Expect = 1e-45
 Identities = 82/155 (52%), Positives = 109/155 (70%)
 Frame = +3

Query: 78  LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 257
           L  +F+ +D + D+ K+LL+EAVAI SVS D   R + IRMVHWM++KL+ +G   EL D
Sbjct: 5   LTNVFQQIDGDYDNLKELLREAVAIQSVSGDPSKRDETIRMVHWMKEKLETIGTICELAD 64

Query: 258 VGFQTIDGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEK 437
           +G Q ++GK V+          +D  K T+ +YGHLDVQPA KSDGW+TEPFELVE++ K
Sbjct: 65  LGTQELEGKTVKLPPVLLGTLGSDKNKKTLLVYGHLDVQPAAKSDGWDTEPFELVEKDGK 124

Query: 438 LYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNFE 542
           L+GRGS+DDKGPVL W H I A +  G +LPVN +
Sbjct: 125 LFGRGSSDDKGPVLCWFHAIRAAQKNGIDLPVNIK 159


>AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.11 protein.
          Length = 472

 Score =  156 bits (378), Expect = 2e-38
 Identities = 71/153 (46%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
 Frame = +3

Query: 87  IFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRDVGF 266
           +FK +D+ +D +  LL+E+VAI SVS D   R DC+RM  W +D+LK +G  T L ++G 
Sbjct: 7   VFKSIDERQDEFIDLLRESVAIQSVSADPARRGDCVRMSEWARDQLKTLGVETSLWELGQ 66

Query: 267 QTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEKLY 443
           QT+  G+ +            D  K T+ IYGHLDVQPA K DGW T PFEL E + KL+
Sbjct: 67  QTLPSGEQLPLPPAVFGVYGRDKSKKTLLIYGHLDVQPAEKEDGWNTNPFELTEIDGKLF 126

Query: 444 GRGSTDDKGPVLGWLHTINAYKGTGAELPVNFE 542
           GRGSTDDKGPV+ W+  +   +  G +LP+N +
Sbjct: 127 GRGSTDDKGPVIAWIAVLKVLQTLGIDLPINIK 159


>Z68214-4|CAA92447.1|  397|Caenorhabditis elegans Hypothetical
           protein C10C5.4 protein.
          Length = 397

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 324 NDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDKGPVLGWLHTIN 500
           + P+  ++ +Y H DV P  + + W  +P+    + +  ++ RG+ D K   LG  H + 
Sbjct: 63  SQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDTK--CLGVQH-VE 118

Query: 501 AYKGTGAE 524
           A++   A+
Sbjct: 119 AFRNLFAK 126


>Z68214-5|CAA92446.2|  397|Caenorhabditis elegans Hypothetical
           protein C10C5.5 protein.
          Length = 397

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 324 NDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDK 467
           + P+  ++ +Y H DV P  + + W  +P+    + +  ++ RG+ D K
Sbjct: 63  SQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDMK 110


>Z68214-3|CAA92445.1|  399|Caenorhabditis elegans Hypothetical
           protein C10C5.3 protein.
          Length = 399

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 324 NDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDK 467
           + P+  ++ +Y H DV P  + + W  +P+    + +  ++ RG+ D K
Sbjct: 63  SQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDMK 110


>Z66521-11|CAA91398.2|  471|Caenorhabditis elegans Hypothetical
           protein W02B12.7 protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +3

Query: 15  YHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSC 167
           Y+ H +    Q++       T+P++   + + K+  K L +E+   PS SC
Sbjct: 11  YNNHTNDLKHQIAQLERKTATIPKLENQLHKAKNQNKVLRRESALFPSASC 61


>AB031233-1|BAA92262.1|  605|Caenorhabditis elegans kinesin like
           protein protein.
          Length = 605

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +3

Query: 15  YHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSC 167
           Y+ H +    Q++       T+P++   + + K+  K L +E+   PS SC
Sbjct: 145 YNNHTNDLKHQIAQLERKTATIPKLENQLHKAKNQNKVLRRESALFPSASC 195


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 280 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 176
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 280 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 176
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 280 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 176
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 48  PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 82


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 280 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 176
           PS++    ++ SV+A  S+NL  +   IR  +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184


>AC006726-1|AAF60453.1|  124|Caenorhabditis elegans Hypothetical
           protein Y23B4A.1 protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -2

Query: 632 YQRIPQVSICPLISCQALRNQISSIHSKMNFKIDRQLSTSALIGID 495
           ++ I   S C L+S   +R   SS+H + N   D +LS   ++ +D
Sbjct: 45  FKHIFLFSFCILVSFSYIRQTPSSMHDRRNNGPDAELSRKNILTVD 90


>AF067945-16|AAC17675.1|  341|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 12 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 7   FLLIINIIQ*VPNKFLQKWQRKKH 78
           FL+I+N+   + N+FL+ W  KK+
Sbjct: 172 FLMILNLFALLTNQFLRTWNLKKY 195


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
           glp-1 protein.
          Length = 1492

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +3

Query: 42  KQVSAKMATEKTLPEIFKYVDQNKDSYKQLLK--EAVAIPSVSCDVKYRAD 188
           K+VS   A+ +   ++ K VD+ +  Y+QL+   +  AIP  + + +YR +
Sbjct: 675 KRVSELCASYEVYRDVSKKVDEGEQFYRQLMARCDQFAIPVHAMEEQYREE 725


>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
           protein Y53H1C.2a protein.
          Length = 1512

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +3

Query: 42  KQVSAKMATEKTLPEIFKYVDQNKDSYKQLLK--EAVAIPSVSCDVKYRAD 188
           K+VS   A+ +   ++ K VD+ +  Y+QL+   +  AIP  + + +YR +
Sbjct: 695 KRVSELCASYEVYRDVSKKVDEGEQFYRQLMARCDQFAIPVHAMEEQYREE 745


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,093,272
Number of Sequences: 27780
Number of extensions: 352170
Number of successful extensions: 943
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)