Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32116
(329 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth facto... 34 0.12
BC125062-1|AAI25063.1| 599|Homo sapiens ARNTL2 protein protein. 33 0.21
BC125061-1|AAI25062.1| 588|Homo sapiens ARNTL2 protein protein. 33 0.21
BC000172-1|AAH00172.3| 578|Homo sapiens ARNTL2 protein protein. 33 0.21
AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens ... 33 0.21
AF256215-1|AAG34652.1| 602|Homo sapiens cycle-like factor CLIF ... 33 0.21
AF246963-1|AAL50342.1| 588|Homo sapiens brain-muscle-ARNT-like ... 33 0.21
AF246962-1|AAL50341.1| 599|Homo sapiens brain-muscle-ARNT-like ... 33 0.21
AF246961-1|AAL50340.1| 622|Homo sapiens brain-muscle-ARNT-like ... 33 0.21
AF246960-1|AAL50339.1| 636|Homo sapiens brain-muscle-ARNT-like ... 33 0.21
AF231339-1|AAF71307.1| 572|Homo sapiens bHLH-PAS transcription ... 33 0.21
AF231338-1|AAF71306.1| 585|Homo sapiens bHLH-PAS transcription ... 33 0.21
AB039921-1|BAB01485.1| 551|Homo sapiens transcription factor BM... 33 0.21
AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens ... 32 0.37
AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens ... 31 0.86
AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet re... 30 2.0
AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens ... 30 2.0
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 30 2.0
BC029657-1|AAH29657.1| 170|Homo sapiens C6orf128 protein protein. 28 6.0
AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens ... 28 6.0
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 28 6.0
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 28 8.0
>AB209631-1|BAD92868.1| 1034|Homo sapiens Fibroblast growth factor
receptor 4 variant protein.
Length = 1034
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 50 QNELCVCVCLFIYFIVRKKVC-CISFIWTCMYM*VGVRVPASRALPLSGAS 199
Q+ CVCVC ++ +R VC C+S+ +C V V P S A L AS
Sbjct: 7 QHVPCVCVCPYVCVCMRVCVCVCVSWPLSCALNAVCVTCPKSVAFALGVAS 57
>BC125062-1|AAI25063.1| 599|Homo sapiens ARNTL2 protein protein.
Length = 599
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 194 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 250
>BC125061-1|AAI25062.1| 588|Homo sapiens ARNTL2 protein protein.
Length = 588
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 183 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 239
>BC000172-1|AAH00172.3| 578|Homo sapiens ARNTL2 protein protein.
Length = 578
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 173 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 229
>AK126213-1|BAC86488.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ44225 fis, clone THYMU3006168. ).
Length = 262
Score = 33.1 bits (72), Expect = 0.21
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 59 LCVCVCLFIYFIVRKKVCCISFIWTCMYM 145
+C+ +C+FIY V VC ++TC+Y+
Sbjct: 159 ICIHICIFIYTYVCMCVCSCIHVYTCVYI 187
>AF256215-1|AAG34652.1| 602|Homo sapiens cycle-like factor CLIF
protein.
Length = 602
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 197 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 253
>AF246963-1|AAL50342.1| 588|Homo sapiens brain-muscle-ARNT-like
transcription factor 2d protein.
Length = 588
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 183 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 239
>AF246962-1|AAL50341.1| 599|Homo sapiens brain-muscle-ARNT-like
transcription factor 2c protein.
Length = 599
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 194 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 250
>AF246961-1|AAL50340.1| 622|Homo sapiens brain-muscle-ARNT-like
transcription factor 2b protein.
Length = 622
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 217 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 273
>AF246960-1|AAL50339.1| 636|Homo sapiens brain-muscle-ARNT-like
transcription factor 2a protein.
Length = 636
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 231 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 287
>AF231339-1|AAF71307.1| 572|Homo sapiens bHLH-PAS transcription
factor MOP9 protein.
Length = 572
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREGEGARRGDTHSNSHIHTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE + DT + +H++ + G T +F + +
Sbjct: 167 LHPKDVAKVKEQLSSFD---ISPRE----KLIDTKTGLQVHSNLHAGRTRVYFGSRR 216
>AF231338-1|AAF71306.1| 585|Homo sapiens bHLH-PAS transcription
factor MOP9 protein.
Length = 585
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREGEGARRGDTHSNSHIHTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE + DT + +H++ + G T +F + +
Sbjct: 180 LHPKDVAKVKEQLSSFD---ISPRE----KLIDTKTGLQVHSNLHAGRTRVYFGSRR 229
>AB039921-1|BAB01485.1| 551|Homo sapiens transcription factor BMAL2
protein.
Length = 551
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 259 LHPKNVVAIKDSLISFIXRLTSPREG-EGARRG-DTHSNSHI-HTSPYKGNTTYFFSNNK 89
LHPK+V +K+ L SF SPRE A+ G HSN H T Y G+ FF K
Sbjct: 146 LHPKDVAKVKEQLSSFD---ISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSFFCRIK 202
>AK096940-1|BAC04906.1| 226|Homo sapiens protein ( Homo sapiens
cDNA FLJ39621 fis, clone SMINT2001158. ).
Length = 226
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -3
Query: 162 TRTPTHIYIQVHIKEIQHTFFLTIK*INKHTHTHNSFCHTDILSV 28
T +H + H + HT+ LT+ I+ H HTH S HT L+V
Sbjct: 26 THIHSHTHPLTHSHPLSHTYPLTLTHIHTHPHTHIS-THTHPLTV 69
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 162 TRTPTHIYIQVHIKEIQHTFFLTIK*INKHTHTHNSFCHTDIL 34
T TH + +H HT LT + H HTHN + D++
Sbjct: 171 THALTHSHTHIHTHMHSHTHPLTHTSTHTHPHTHNVWLTQDLV 213
>AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ38312 fis, clone FCBBF3021506. ).
Length = 134
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 63 VCVCVYLFILLLEKKYVVFPLYGLVCICELECVSPRLAPSPSRGLVK----RXINEINES 230
+CVC+Y+ + + YV ++ +C+C CV + S LV R + IN +
Sbjct: 64 ICVCLYVCVFVCVCMYVYLCVFVCMCLCVCICVCVCVCVCVSSHLVLTMTCRGSSVINPT 123
Query: 231 LIAT 242
L++T
Sbjct: 124 LLST 127
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 61 MCVCVFIYLFYC*KKSMLYFLYMDLYVYVSWSAC 162
MC CVF+Y+ C + F+ + +YVY+ C
Sbjct: 54 MCSCVFVYVCICVCLYVCVFVCVCMYVYLCVFVC 87
>AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet
receptor for type I collagen protein.
Length = 532
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 39 YLYDKTNYVCVCVYLFI 89
YLY+KT VC+CV LFI
Sbjct: 30 YLYEKTVCVCLCVCLFI 46
>AK126884-1|BAC86735.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ44936 fis, clone BRAMY3018121. ).
Length = 175
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 162 TRTPTHIYIQVHIKEIQHTFFLTIK*INKHTHTH-NSFCHTDI 37
T T YIQ HI HT+ T +KH H H + HT I
Sbjct: 95 TCTYKRTYIQGHIHTHMHTYTCTCTHTHKHIHAHIHIHTHTHI 137
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 60 YVCVCVYLFILLLEKKYVVFPLYGLVCICELECVSPRLAPS 182
++CVCVY+ + + Y+ +Y V +C CVS L S
Sbjct: 94 FLCVCVYVSVSVCLCVYLHISVYLCVYVCICVCVSVSLCVS 134
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 63 VCVCVYLFILLLEKKYVVFPLYGLVCICELECVSPRLAPSPS 188
VCVC+ + + + Y+ L + +CE CVS L+ P+
Sbjct: 157 VCVCLCVSVYVCVSSYLCVYLCVCMYVCECVCVSVSLSDPPA 198
>BC029657-1|AAH29657.1| 170|Homo sapiens C6orf128 protein protein.
Length = 170
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 4 KLISQFNVHRQNICMTKRIMCVCVFIYLFYC*KKSMLYFLYMDLYVYVSW 153
+L++ HR NI + + + +L YC K+ +YM L +Y W
Sbjct: 47 ELVTWTLFHRANISTGLSLTTIIIGCFLLYCIHKN----IYMGLLIYAMW 92
>AK128416-1|BAC87430.1| 303|Homo sapiens protein ( Homo sapiens
cDNA FLJ46559 fis, clone THYMU3040126. ).
Length = 303
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 62 CVCVCLFIYFIVRKKVCCISFIWTCMYM*VGVRV 163
CVCVC Y VC + I+ MY+ V R+
Sbjct: 108 CVCVCTHAYIHTHVCVCVHTHIYIHMYVCVYTRI 141
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 59 LCVCVCLFIYFIVRKKVCCISFIWTCMYM 145
LCVCVCL + + +C + +W C ++
Sbjct: 127 LCVCVCLCVGAHLCVCLCVCACVWGCTFV 155
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 63 VCVCVYLFILLLEKKYVVFPLYGLVCICELECVSPRLAPSP 185
VC+CV L + + V + VC+C C+ + P+P
Sbjct: 155 VCLCVCLCLCVFLCVCVFVSVCVSVCVCVCMCIGRTVVPAP 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,581,794
Number of Sequences: 237096
Number of extensions: 909790
Number of successful extensions: 2770
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2682
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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