Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32116
         (329 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077531-4|AAC64611.1|  437|Caenorhabditis elegans Hypothetical ...    29   0.60 
Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical pr...    29   0.79 
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr...    28   1.4  
Z66520-8|CAE17837.1|  357|Caenorhabditis elegans Hypothetical pr...    28   1.8  
Z81123-5|CAB76411.2|  393|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z50071-9|CAA90404.3|  393|Caenorhabditis elegans Hypothetical pr...    27   3.2  
AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical...    27   3.2  
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ...    27   4.2  
Z77658-2|CAB01156.1|  457|Caenorhabditis elegans Hypothetical pr...    26   5.5  
U80931-1|AAB37998.2|  343|Caenorhabditis elegans Hypothetical pr...    26   5.5  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    26   7.3  
Z75547-7|CAA99904.1|  302|Caenorhabditis elegans Hypothetical pr...    26   7.3  
U28737-2|AAA68272.1|  455|Caenorhabditis elegans Patterned expre...    26   7.3  
AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical ...    26   7.3  
Z81118-4|CAB03327.1|  309|Caenorhabditis elegans Hypothetical pr...    25   9.7  

>AF077531-4|AAC64611.1|  437|Caenorhabditis elegans Hypothetical
           protein F13C5.1 protein.
          Length = 437

 Score = 29.5 bits (63), Expect = 0.60
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -2

Query: 148 SHIHTSPYKGNTTYFFSNNKINK*THTHT*FVLSYRYFVCEH*IVKLI 5
           S + + P+   T  FF   +I++ THTHT  V    +F+  H ++ L+
Sbjct: 32  SSLASLPFSKTTPSFF---QIHRHTHTHTILVFVVHFFISIHLVLSLL 76


>Z70038-1|CAA93884.1| 2219|Caenorhabditis elegans Hypothetical
           protein ZK1067.2 protein.
          Length = 2219

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 172 RRGDTHSNSHIHTSPYKGNTTY 107
           R G  H   H  TSP+K NTTY
Sbjct: 633 RNGSLHFAVHEETSPFKPNTTY 654


>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical protein
            F46H5.4 protein.
          Length = 2018

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = -2

Query: 298  EIHNRMSYIFPSLLHPKNVVAIKDSLISFIXRLTSPREGEGARRGDTHSNSHIHTSPYKG 119
            EI NR+   + ++    NVV +KDS    + +L      E A    T  + ++  +    
Sbjct: 1762 EISNRLETFYTNMYGEGNVVVLKDSKPVQLEKLNP----EKAYIQITFVDVYLSDNEKME 1817

Query: 118  NTTYFFSNNKINK 80
             TTYF   N +N+
Sbjct: 1818 RTTYFTRRNNVNR 1830


>Z66520-8|CAE17837.1|  357|Caenorhabditis elegans Hypothetical
           protein F49E12.12 protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +1

Query: 10  ISQFNVHRQNICMTKRIMCVCVFIYLFYC*KKSMLYFLYMDLYVY-VSWSA 159
           +  ++V+R+N  + +R+ C+ +F +      K  + FLY    +Y   W A
Sbjct: 228 LESYDVNRKNSRVLERVFCIALFAFCLPVVCKDYISFLYTYPCLYHTEWPA 278


>Z81123-5|CAB76411.2|  393|Caenorhabditis elegans Hypothetical
           protein T07D4.1 protein.
          Length = 393

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 115 YFLYMDLYVYVSWSACPRVSRP 180
           YFLY   Y Y+  SAC R S P
Sbjct: 172 YFLYAQNYTYLGVSACFRGSMP 193


>Z50071-9|CAA90404.3|  393|Caenorhabditis elegans Hypothetical
           protein T07D4.1 protein.
          Length = 393

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 115 YFLYMDLYVYVSWSACPRVSRP 180
           YFLY   Y Y+  SAC R S P
Sbjct: 172 YFLYAQNYTYLGVSACFRGSMP 193


>AL031627-18|CAA20951.1|  347|Caenorhabditis elegans Hypothetical
           protein Y102A5C.29 protein.
          Length = 347

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 10  ISQFNVHRQN-ICMTKRIMCVCVFIYLFYC*KKSMLYFLYMDLYVYVSWSAC 162
           +  + +HR   I +  +++C CVFI++ Y     + +   ++L VY+S   C
Sbjct: 233 VQTYQMHRTALISLAMQMVCPCVFIFVVYF-YALVAWIDDVELQVYISRCPC 283


>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
           protein Y54E2A.6 protein.
          Length = 1798

 Score = 26.6 bits (56), Expect = 4.2
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 162 TRTPTHIYI-QVHIKEIQHTFFLTIK*INKHTHTHNSFCHTDILSVN 25
           T TPT I+  Q+H K  Q +F+L ++ +N++   H        + VN
Sbjct: 833 TLTPTFIWNDQIHGKSGQQSFYLVLENLNENLIIHQERIGIGKMKVN 879


>Z77658-2|CAB01156.1|  457|Caenorhabditis elegans Hypothetical
           protein F14D7.2 protein.
          Length = 457

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 187 EGEGARRGDTHSNSHIHTSPYKGNTTYFFSNNKINK 80
           EG+  +R D +S S   T P  G++T      K  K
Sbjct: 307 EGKDVKRSDCYSPSECSTQPSSGSSTALIVPTKAGK 342


>U80931-1|AAB37998.2|  343|Caenorhabditis elegans Hypothetical
           protein T01B11.1 protein.
          Length = 343

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 71  VCLFIYFIVRKKVCCISFIWTCMY 142
           VC    FI     C I++IW C++
Sbjct: 79  VCKLELFISNSAACFINWIWLCLF 102


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 63  VCVCVYLFILLLEKKYVVFPLYGLVCIC 146
           + +C++ FI L +K   +F +   +C+C
Sbjct: 306 IFLCIFHFIFLTQKSIPIFGILIGICLC 333


>Z75547-7|CAA99904.1|  302|Caenorhabditis elegans Hypothetical
           protein R11D1.6 protein.
          Length = 302

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 13  SQFNVHRQNICMTKRIMCVCVFIYLFYC*K-KSMLYFLYMDLYV 141
           S F  H QN+C+   I+  C  IYL      K +  + Y+ LY+
Sbjct: 7   SLFCGHLQNVCVCLTIILNCYMIYLIINKSPKKIGNYKYLMLYI 50


>U28737-2|AAA68272.1|  455|Caenorhabditis elegans Patterned
           expression site protein23 protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +1

Query: 7   LISQFNVHRQNICMTKRIMCVCVFIYLFYC*KKSMLYFLYMDLYVYVS----WSAC 162
           +IS+ N+H  ++C+    MC    + LF   K     ++ + L  Y S    W AC
Sbjct: 313 IISRRNLHLISLCINGISMCASGVLILFGLQKNYPTIYVLVFLIGYASIEFIWDAC 368


>AL032630-1|CAA21558.1|  366|Caenorhabditis elegans Hypothetical
           protein Y62H9A.1 protein.
          Length = 366

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 28  HRQNICMTKRIMCVCVFIYLFY 93
           H  NIC T  I+C   F+Y F+
Sbjct: 105 HLFNICCTLAILCSMSFLYSFW 126


>Z81118-4|CAB03327.1|  309|Caenorhabditis elegans Hypothetical
           protein T10G3.4 protein.
          Length = 309

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 59  LCVCVCLFIYFIVRK 103
           +C+C+CL I F V +
Sbjct: 161 ICICICLVILFFVNR 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,567,254
Number of Sequences: 27780
Number of extensions: 152585
Number of successful extensions: 398
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)