Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32110
         (590 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347...    27   8.5  
08_02_0530 + 18244933-18245217,18245309-18245383,18246176-182462...    27   8.5  
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605...    27   8.5  

>11_01_0449 -
           3473662-3475049,3476026-3476128,3476215-3476439,
           3476689-3476856,3477414-3477529,3477640-3477792,
           3477879-3478022,3478980-3479583
          Length = 966

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 461 NLLLVFRFLIFERYDLRPDAAYNEALK 381
           N+LL F FL+ E YD+R   A  E ++
Sbjct: 872 NMLLEFLFLLVENYDVRRKEAIAECVR 898


>08_02_0530 +
           18244933-18245217,18245309-18245383,18246176-18246292,
           18246503-18246631,18246726-18246785,18247271-18247441,
           18247596-18247689,18247860-18247951,18248071-18248220,
           18248407-18248465,18249735-18249864
          Length = 453

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 215 FTQAGQVSAKGLSTKCYPFFCRTMVYKQSTSQYYKEIHHIAFIT 84
           + Q  Q+++ G    CY  FC  + Y+  +  YY     IAF++
Sbjct: 107 YYQPSQMASLGPDA-CYLLFCLMLAYEVFSCLYYASQSKIAFVS 149


>04_04_1400 -
           33259716-33260069,33260172-33260219,33260471-33260596,
           33260850-33260900,33260963-33261055,33261217-33261272,
           33261465-33261522,33262306-33262365,33262513-33262623,
           33263368-33263949,33264026-33264097
          Length = 536

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 175 VDSPFALTCPACVN*KCRRLFVFAVTPIDLYFRSLFYIIILNIDLEK 315
           +D+ +ALTC   VN K + L  F +  I +   S+   I  NI+L K
Sbjct: 327 IDAEYALTCDRIVNLKDKDLSFFVLLVIIVLCLSMARKIKENIELTK 373


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,903,299
Number of Sequences: 37544
Number of extensions: 269209
Number of successful extensions: 611
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)