Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32109
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z93388-12|CAB07661.2|  294|Caenorhabditis elegans Hypothetical p...    27   9.7  

>AF039710-7|AAB96687.1|  123|Caenorhabditis elegans Hypothetical
           protein C46E10.2 protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 115 FYNIYWSKYNIFSTTF 68
           F+NIYWS Y IF  TF
Sbjct: 11  FFNIYWSFYAIFGFTF 26


>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
           protein F56H1.5 protein.
          Length = 1015

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 586 YFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 485
           +FT K K+    L R N+C     V+R H  SSS
Sbjct: 245 FFTMKNKRTRTQLLRENICKYLLEVLRRHLASSS 278


>Z81050-8|CAB02859.1|  371|Caenorhabditis elegans Hypothetical
           protein C50B6.10 protein.
          Length = 371

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -3

Query: 169 ISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIF 35
           + F+YR +  F + +   F+N  W  + IF    F   W+ S  F
Sbjct: 111 VQFVYRYWAIF-HVRRLSFFNGIWILFWIFLAMMFGVDWSCSVYF 154


>Z93388-12|CAB07661.2|  294|Caenorhabditis elegans Hypothetical
           protein T10C6.4 protein.
          Length = 294

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = -3

Query: 673 NFISTFILIFWTS*SLYFNFTRIWYNFSYYF 581
           N++ T+I+I WT   + +++   +YN S+ F
Sbjct: 111 NYVLTYIIINWTLPPVIYSYFFFFYNCSFPF 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,484
Number of Sequences: 27780
Number of extensions: 204283
Number of successful extensions: 451
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)