Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32106
         (509 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0426 + 3364341-3364713,3364823-3364963,3365389-3365510,336...    28   3.8  
04_01_0430 + 5651326-5651820,5651886-5652124,5652265-5652507,565...    27   6.6  

>05_01_0426 +
           3364341-3364713,3364823-3364963,3365389-3365510,
           3365939-3366202,3366289-3366419,3366819-3367026,
           3367121-3367186,3367276-3367353,3368038-3368079
          Length = 474

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 503 RPHQAQPFVERPTDQLVQGRL 441
           +PH+ QP V  P   +VQGRL
Sbjct: 205 KPHEPQPEVHLPDKSIVQGRL 225


>04_01_0430 +
           5651326-5651820,5651886-5652124,5652265-5652507,
           5653159-5653360,5653679-5654035
          Length = 511

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 410 GSDFLHSVERRAGLEPVDLLVVQRMVELDADG 505
           G   L + ++  G+ PV+   +QR+ EL ADG
Sbjct: 400 GQPDLIAAQKTNGIGPVEKAAIQRLNELSADG 431


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,538,920
Number of Sequences: 37544
Number of extensions: 170704
Number of successful extensions: 324
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)