Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32106
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-9|AAN63393.1|  683|Caenorhabditis elegans Aconitase prote...    54   8e-08
L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase prote...    54   8e-08
L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase prote...    54   8e-08
Z81017-13|CAB02674.2|  526|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z68005-5|CAA91993.2|  526|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>L25599-9|AAN63393.1|  683|Caenorhabditis elegans Aconitase protein
           2, isoform c protein.
          Length = 683

 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 508 STVRIKLNHSLNDQQINWFKAGSALNRMKEI 416
           S V + LNH+ N+QQI WFKAGSALNRMKE+
Sbjct: 648 SKVEVTLNHTFNEQQIEWFKAGSALNRMKEV 678


>L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase protein
           2, isoform b protein.
          Length = 665

 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 508 STVRIKLNHSLNDQQINWFKAGSALNRMKEI 416
           S V + LNH+ N+QQI WFKAGSALNRMKE+
Sbjct: 630 SKVEVTLNHTFNEQQIEWFKAGSALNRMKEV 660


>L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase protein
           2, isoform a protein.
          Length = 777

 Score = 53.6 bits (123), Expect = 8e-08
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -2

Query: 508 STVRIKLNHSLNDQQINWFKAGSALNRMKEI 416
           S V + LNH+ N+QQI WFKAGSALNRMKE+
Sbjct: 742 SKVEVTLNHTFNEQQIEWFKAGSALNRMKEV 772


>Z81017-13|CAB02674.2|  526|Caenorhabditis elegans Hypothetical
           protein F59F3.4 protein.
          Length = 526

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
 Frame = +1

Query: 145 IRFTAVTKYCLRNALMYYLNYTMTRLHWL-------HLIPLKRLQYSRVN 273
           IRF+  TK  L+   +Y+ + T   +H+L       H+I LK +Q  R+N
Sbjct: 165 IRFSTKTKIRLKKKGLYFKHGTEEDVHYLSSKPHTHHMIRLKLIQIDRLN 214


>Z68005-5|CAA91993.2|  526|Caenorhabditis elegans Hypothetical
           protein F59F3.4 protein.
          Length = 526

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
 Frame = +1

Query: 145 IRFTAVTKYCLRNALMYYLNYTMTRLHWL-------HLIPLKRLQYSRVN 273
           IRF+  TK  L+   +Y+ + T   +H+L       H+I LK +Q  R+N
Sbjct: 165 IRFSTKTKIRLKKKGLYFKHGTEEDVHYLSSKPHTHHMIRLKLIQIDRLN 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,930,974
Number of Sequences: 27780
Number of extensions: 181046
Number of successful extensions: 392
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)