Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32103
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23511-4|AAC46793.1| 288|Caenorhabditis elegans Temporarily ass... 167 1e-41
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical pr... 31 0.88
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 30 1.5
Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 29 4.7
AL021491-2|CAA16375.1| 319|Caenorhabditis elegans Hypothetical ... 28 6.2
>U23511-4|AAC46793.1| 288|Caenorhabditis elegans Temporarily
assigned gene nameprotein 337 protein.
Length = 288
Score = 167 bits (405), Expect = 1e-41
Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +1
Query: 145 MTPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNK-EELKNIIKEFIHTQDYNKA 321
MTP EL +DD AT L+VD L TTHKM+ + R L ++ + ++K F +D+ A
Sbjct: 24 MTPTELCYFDDFATTLVVDSVLNFTTHKMSKKRRYLYQDEYRTARTVMKTFREQRDWTNA 83
Query: 322 YSKLANGEWIPRHFSK-NKHQQTKFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKI 498
L + SK ++ +FRDHI R+L +F +G+ I+ C RYS EG GAK+
Sbjct: 84 IYGLLTLRSVSHFLSKLPPNKLFEFRDHIVRFLNMFILDSGYTIQECKRYSQEGHQGAKL 143
Query: 499 SSTKKFFKHERIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPAAYIN 678
ST + + ++I+ L G + ++ E+E +L +DFSVMYS RK C+ LWLGP AYIN
Sbjct: 144 VSTGVWSRGDKIERLSGVVCLLSSEDEDSILAQEGSDFSVMYSTRKRCSTLWLGPGAYIN 203
Query: 679 HDCRPTCTFEATDRGKAFVRVLRDI 753
HDCRPTC F + A +RVLRD+
Sbjct: 204 HDCRPTCEF-VSHGSTAHIRVLRDM 227
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 658 GPAAYINHDCRPTCTFEATDRG 723
GPA YINH C P C+ + D G
Sbjct: 2489 GPARYINHSCDPNCSTQILDAG 2510
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 658 GPAAYINHDCRPTCTFEATDRG 723
GPA YINH C P C+ + D G
Sbjct: 2489 GPARYINHSCDPNCSTQILDAG 2510
>Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical
protein T15D6.11 protein.
Length = 338
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 608 SFFPGCNNCFSSSSVISAMHPTKKSILSCLK 516
+ P CNN +V+S M KK L+C+K
Sbjct: 66 AMLPACNNLKLQKNVLSMMRVVKKEFLACIK 96
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 259 NKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRDHIY 408
+KE L + +++ TQ Y+ Y+ LAN EW ++ ++ + D +Y
Sbjct: 24 SKETLFSALQQEAETQRYDGWYNNLANSEWGSAGSRLHRDARSYYSDGVY 73
>Z92786-4|CAB07206.1| 553|Caenorhabditis elegans Hypothetical
protein F47H4.7 protein.
Length = 553
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 177 SSNGSNRGPISRHHDTQDEYP 239
S + ++ GP +RHHD D++P
Sbjct: 142 SQSANSPGPSARHHDKDDDFP 162
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical protein
T11G6.5 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 148 TPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNKEELKNIIK 288
T R L ++D + +++DP LG KMN L T LK ++K
Sbjct: 1238 TLRPLIDHDVESLCILIDPELGTDNMKMN-ELNSLFTEMHNLKKLMK 1283
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 148 TPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNKEELKNIIK 288
T R L ++D + +++DP LG KMN L T LK ++K
Sbjct: 1238 TLRPLIDHDVESLCILIDPELGTDNMKMN-ELNSLFTEMHNLKKLMK 1283
>AL021491-2|CAA16375.1| 319|Caenorhabditis elegans Hypothetical
protein Y44A6B.3 protein.
Length = 319
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3
Query: 418 VNNDKYGLETWSADVYFY*NVEVSI 344
VN Y LE +S D YFY N VSI
Sbjct: 115 VNKTIYSLEFYSDDPYFYFNYTVSI 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,829,214
Number of Sequences: 27780
Number of extensions: 354848
Number of successful extensions: 964
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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