BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32103
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 26 0.33
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 26 0.33
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 26 0.33
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 26 0.33
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 26 0.33
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 24 1.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 23 3.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 4.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 4.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 4.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 4.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 4.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 4.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 4.1
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 5.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.4
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 9 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 61
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 242 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 294
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.2 bits (55), Expect = 0.33
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + K YS+ E + KNK + K+R+
Sbjct: 242 NREYRKKDRQYEKLHNEKEKFLEERTSRKRYSRSRERE---QKLYKNKREYRKYRE 294
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.2 bits (50), Expect = 1.3
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRD 399
N YR E+L N ++F+ + +K YS+ E + KN+ + K+R+
Sbjct: 242 NREYRKKDRQYEKLHNEKEKFLEERTSHKRYSRSRERE---QKSYKNEREYRKYRE 294
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.0 bits (47), Expect = 3.1
Identities = 6/23 (26%), Positives = 14/23 (60%)
Frame = -2
Query: 281 MFFNSSLFVFKGL*RIFILCVVM 213
+F+N+ ++ L +I C++M
Sbjct: 337 LFYNTDFIIYSSLSSFYIPCIIM 359
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 388 WSADVYFY*NVEVSIHHWLVLNKL 317
W D YFY +H V NKL
Sbjct: 118 WRPDTYFYNGKHSYVHTITVPNKL 141
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFR 396
N YR E+L N ++F+ + K YS+ E + KN++ K+R
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSRERE---QKSYKNENSYRKYR 60
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFR 396
N YR E+L N ++F+ + K YS+ E + KN++ K+R
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSRERE---QKSYKNENSYRKYR 60
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFR 396
N YR E+L N ++F+ + K YS+ E + KN++ K+R
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSRERE---QKSYKNENSYRKYR 60
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFR 396
N YR E+L N ++F+ + K YS+ E + KN++ K+R
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSRERE---QKSYKNENSYRKYR 60
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFR 396
N YR E+L N ++F+ + K YS+ E + KN++ K+R
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSRERE---QKSYKNENSYRKYR 60
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 232 NIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFR 396
N YR E+L N ++F+ + K YS+ E + KN++ K+R
Sbjct: 9 NREYRKKDRRYEKLHNEKEKFLEERTSRKRYSRSRERE---QKSYKNENSYRKYR 60
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/42 (19%), Positives = 20/42 (47%)
Frame = -1
Query: 162 QLARSHTHRLHLVEHLPYRVRR*SNNHSGYTNHRIYVKFIFI 37
++ R + ++ L + +NN++ Y N ++Y +I
Sbjct: 292 RMERERSKEPKIISSLSNKTIHNNNNYNNYNNKKLYYNINYI 333
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +2
Query: 344 NGYLDILVKINISRPSFETIFIVIYEFLTRK 436
N Y+D I + P + +Y LTRK
Sbjct: 809 NSYVDASYMIAFAYPIMLIVVCTVYAVLTRK 839
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 9.4
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 187 PLLDHRIRTAREESYPSAASCGALALQGKTLIQQP 83
P+ +R +EE A SCG G T++ P
Sbjct: 350 PVTQGLLRVKKEEELQEAPSCGG----GPTILTTP 380
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,665
Number of Sequences: 438
Number of extensions: 4771
Number of successful extensions: 26
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -