Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32100
(492 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 44 9e-06
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 33 0.023
SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit... 28 0.88
SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces po... 27 1.2
SPBC29A3.12 |rps902|rps9-2, rps9b|40S ribosomal protein S9|Schiz... 27 1.5
SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 27 1.5
SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |S... 27 2.0
SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway prote... 26 2.7
SPCC306.06c |||ER membrane protein, BIG1 family |Schizosaccharom... 26 3.5
SPAC24H6.07 |rps901|rps9-1, rps9a|40S ribosomal protein S9|Schiz... 26 3.5
SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual 25 4.7
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 25 4.7
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 25 8.2
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 44.4 bits (100), Expect = 9e-06
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Frame = +1
Query: 160 LKTMKYDFEPKYVNLRKAEHYSEDFTKVNRMQRVP-VIDH--NGFILTESIAILKYLSRE 330
LK + +E +YVN K E S + +N RVP +IDH N + + ES AIL YL+ +
Sbjct: 22 LKELDLTYETRYVNFSKNEQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADK 81
Query: 331 NIIAESL-YSKESKLQARIEEFLEWQHIGLRLHW--AMYFRVVHMDPILTGRNQTKN 492
+ ++ ++ ++L +Q G + W A +F V H + +++ + +N
Sbjct: 82 YDTERKISLPRDHPEYYKVIQYLFFQASGQGIIWGQAGWFSVYHQELVISAITRYRN 138
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 33.1 bits (72), Expect = 0.023
Identities = 25/102 (24%), Positives = 54/102 (52%)
Frame = +1
Query: 103 VLKLYYDLMSQPSRVLYILLKTMKYDFEPKYVNLRKAEHYSEDFTKVNRMQRVPVIDHNG 282
++ L++ S+ +R+++ +L+ +K +E K + R +TK++ + + P++ +G
Sbjct: 1 MIVLHHLKNSRSTRIVW-MLEELKVPYEIKVYD-RVDGRAPPAYTKLSPLGKSPIVVDDG 58
Query: 283 FILTESIAILKYLSRENIIAESLYSKESKLQARIEEFLEWQH 408
ES AIL++L R+ S E + A +E++ W H
Sbjct: 59 VTYIESAAILEHLVRK--YGPSFKPSEEDV-AELEKYELWMH 97
>SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 27.9 bits (59), Expect = 0.88
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 118 YDLMSQPSRVLYILLKTMKYDFEPKYVNLRKAEHYSEDFTKVNRMQRVPV-IDHNGFILT 294
Y + P RVL+ + E ++V+++ ++ D +Q++PV + +GF L+
Sbjct: 7 YGKIGSP-RVLFCVSVAAVAGVEVEHVDVQP-HNFPADLAAKFPLQKMPVFVGKDGFPLS 64
Query: 295 ESIAILKYLSREN 333
E++AI YL+ N
Sbjct: 65 ETLAIAFYLASLN 77
>SPCC1183.02 |||glutathione S-transferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 1.2
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 220 YSEDFTKVNRMQRVPV-IDHNGFILTESIAILKY 318
+S D +Q++PV I +GF L+E IAI+KY
Sbjct: 39 FSADLAAKFPLQKLPVFIGADGFELSEVIAIVKY 72
>SPBC29A3.12 |rps902|rps9-2, rps9b|40S ribosomal protein
S9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 192
Score = 27.1 bits (57), Expect = 1.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 289 LTESIAILKYLSRENIIAESLYSKESKLQARIEEFLE 399
L E AI++ L R I+ ES + L RIE+FLE
Sbjct: 70 LFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLE 106
>SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 396
Score = 27.1 bits (57), Expect = 1.5
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 241 VNRMQRVPVIDHNGFILTESIAILKYLSRENIIAESLY-SKESKLQARIEEFLEWQHI 411
V+R+QR P + G + T + +++ N + SLY S E K++ QH+
Sbjct: 215 VHRVQRTPATETKGRVHTSTASVIVLPQVSNDESSSLYDSSEVKIEVMRSRGAGGQHV 272
>SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 445
Score = 26.6 bits (56), Expect = 2.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 154 ILLKTMKYDFEPKYVNLRKAEHYSEDFTKVNRMQRVPVIDHNGFILTESIAILKYLSREN 333
I+ M+Y+ E ++ + + F+ + ++ VP + FI+ + + LKYL +N
Sbjct: 218 IIKVNMEYNSETQFFIFEEMVTGGDLFSYLTKLGTVPEVT-TLFIMFQILQGLKYLHEQN 276
Query: 334 IIAESL 351
II L
Sbjct: 277 IIHRDL 282
>SPAC27D7.12c |but1|SPAC27D7.12, mug107|neddylation pathway protein
But1 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 26.2 bits (55), Expect = 2.7
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 169 MKYDFEPKYVNLRKAEHYSEDFTKVNRMQRVPVIDHNGFIL 291
M+ FEP ++NL K + +N + ++P++ + F+L
Sbjct: 68 MEVVFEPCFINLSKPVYVVNGIGGINEIHKLPIL-FSSFVL 107
>SPCC306.06c |||ER membrane protein, BIG1 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 25.8 bits (54), Expect = 3.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 471 SQYWIHMHNSEIHGPVQTK--TYMLPLKEFFNPGLKLGFLRVKTL 343
SQ + MH + H PV T + +FF PGL +G+L + L
Sbjct: 239 SQTTLAMHQTRKH-PVTDNGATGLFTEYQFFTPGLYMGYLALAVL 282
>SPAC24H6.07 |rps901|rps9-1, rps9a|40S ribosomal protein
S9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 191
Score = 25.8 bits (54), Expect = 3.5
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 289 LTESIAILKYLSRENIIAESLYSKESKLQARIEEFLE 399
L E AI++ L R I+ E+ + L RIE+FLE
Sbjct: 70 LFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLE 106
>SPCC550.07 |||acetamidase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 4.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 214 EHYSEDFTKVNRMQRVPVIDHNGFILTESIAILKYLSRENIIAESLYSKESKLQARIEE 390
E+Y++ + V + VPV + A +L++ NIIAE K+S L A + +
Sbjct: 112 EYYAKTGSLVGPLHGVPVSVKEHISIKNHTATASFLAKANIIAE----KDSDLVATVRK 166
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 25.4 bits (53), Expect = 4.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 462 WIHMHNSEIHGPVQTKTYMLPLKEFFNPGLKLGFL 358
+I M S+ + T TY++ + + PGL LG+L
Sbjct: 367 YIIMLASDSNAAKYTATYIIAIGCYIGPGLNLGWL 401
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 24.6 bits (51), Expect = 8.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 208 KAEHYSEDFTKVNRMQRVPVIDHNGFILTE 297
K+ +YSE +K+ R R +ID +LTE
Sbjct: 2234 KSTYYSERLSKLLRSDRKGMIDSLAQVLTE 2263
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,768,657
Number of Sequences: 5004
Number of extensions: 32222
Number of successful extensions: 110
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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