Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32095
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpa...    67   9e-12
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    28   5.3  
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p...    27   7.0  
AF078789-3|AAK68487.1|  295|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF078789-2|AAK21516.1|  318|Caenorhabditis elegans Hypothetical ...    27   9.2  

>U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpase
           protein 10 protein.
          Length = 126

 Score = 66.9 bits (156), Expect = 9e-12
 Identities = 37/90 (41%), Positives = 51/90 (56%)
 Frame = +1

Query: 121 KRKAKRLKQAKEEAQDEVXXXXXXXXXXXXXXXAKHMGTREGVAAKIDAETKVKIEEMNK 300
           KRK +R KQAK+EAQ EV                +++GT+E + +KI  +T+ +I  M +
Sbjct: 27  KRKLQRTKQAKQEAQAEVEKYKQQREAEFKAFEQQYLGTKEDIESKIRRDTEDQISGMKQ 86

Query: 301 MVQTQKEAXIKDVLNLVYDIKPELHMNYRL 390
            V   K+A I  +L LV DIKPELH N  L
Sbjct: 87  SVAGNKQAVIVRLLQLVCDIKPELHHNLTL 116



 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +3

Query: 42  MASQTQGIQQLLAAEKRAAEKVSEARXAKSETPK 143
           MASQTQGIQQLLAAEKRAAEK++EAR  K +  K
Sbjct: 1   MASQTQGIQQLLAAEKRAAEKINEARKRKLQRTK 34


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 101 ESQRGKXSEKRNA*SRPRRRLKMKLKSTDRSVKGSSKNLKPSTWV 235
           E QR     K N   R +R +K + +STD+   GS K  +P+T V
Sbjct: 327 EFQRYLIETKENRSVRSKR-VKSEFQSTDKKRAGSEKQKRPATKV 370


>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
           protein ZK1236.3a protein.
          Length = 1000

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 161 LKMKLKSTDRSVK-GSSKNLKPSTWVPGKVLRPRSMPR 271
           + +K  S   S K  SS+ LKP T++P     P SMP+
Sbjct: 3   INIKYSSKFSSSKTSSSEELKPKTYIPAYYQPPVSMPK 40


>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
            protein C52B9.8 protein.
          Length = 1336

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/20 (50%), Positives = 17/20 (85%)
 Frame = +1

Query: 112  RQGKRKAKRLKQAKEEAQDE 171
            R+ +++AKRLK+ KEE +D+
Sbjct: 1278 RRARKEAKRLKRQKEEQEDD 1297


>AF078789-3|AAK68487.1|  295|Caenorhabditis elegans Hypothetical
           protein Y44E3B.1b protein.
          Length = 295

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 82  LKNALRRKSARQGKRKAKRLKQAKEEAQDEV 174
           LK A    + R+ + KAK L+  K+E  DE+
Sbjct: 233 LKRARNNDAVRKSRNKAKELQLQKDEEYDEM 263


>AF078789-2|AAK21516.1|  318|Caenorhabditis elegans Hypothetical
           protein Y44E3B.1a protein.
          Length = 318

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 82  LKNALRRKSARQGKRKAKRLKQAKEEAQDEV 174
           LK A    + R+ + KAK L+  K+E  DE+
Sbjct: 233 LKRARNNDAVRKSRNKAKELQLQKDEEYDEM 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,975,030
Number of Sequences: 27780
Number of extensions: 157611
Number of successful extensions: 448
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)